GIORDANO, Bruna; DARIC, Vladimir; BRAMANTI, Lorenzo; DELCAMP, Adline; GUICHOUX, Erwan; CANNAS, Rita; GUIZIEN, Katell

doi:10.1007/s12686-025-01395-5

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GIORDANO, Bruna
Laboratoire d'Ecogéochimie des environnements benthiques [LECOB]

DARIC, Vladimir
Biologie intégrative des organismes marins [BIOM]

BRAMANTI, Lorenzo
Laboratoire d'Ecogéochimie des environnements benthiques [LECOB]

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Conservation Genetics Resources. 2025-07-02

Springer

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A set of single nucleotide polymorphism (SNPs) markers was developed from the transcriptome of ten individuals of the Mediterranean red coral (Corallium rubrum). Seven hundred sixty-five putative SNPs, suitable as genetic markers, were identified, and a subset of 320 SNPs was tested using a MassARRAY System on 71 samples. A total of 179 SNPs were successfully genotyped, and 123 of them were polymorphic, with unambiguous signals, and in Hardy-Weinberg equilibrium, showing a significant Linkage Disequilibrium in 20 pairs of SNPs. The newly developed markers will be a useful tool for population genetics and parentage studies of this valuable octocoral.< Leer menos

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Single nucleotide polymorphism

Genotyping

MassARRAY

RNA-seq

Cnidarian

Corallium rubrum

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Identification of a set of SNPs markers for parentage analysis of the mediterranean red coral (Corallium rubrum)

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