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Sex-specific DNA methylation and transcription of zbtb38 and effects of gene–environment interactions on its natural antisense transcript in zebrafish
DAFFE, Guillemine
Pluridisciplinarité au service de l’observation et de la recherche en environnement et astronomie [UMS POREA]
Pluridisciplinarité au service de l’observation et de la recherche en environnement et astronomie [UMS POREA]
NIKOLSKI, Macha
Centre de Bioinformatique de Bordeaux [CBIB]
Institut de biochimie et génétique cellulaires [IBGC]
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Centre de Bioinformatique de Bordeaux [CBIB]
Institut de biochimie et génétique cellulaires [IBGC]
Idioma
EN
Article de revue
Este ítem está publicado en
Epigenetics. 2023, vol. 18, n° 1, p. 2260963
Resumen en inglés
There is increasing evidence for the involvement of epigenetics in sex determination, maintenance and plasticity, from plants to humans. In our previous work we reported a transgenerational feminization of a zebrafish ...Leer más >
There is increasing evidence for the involvement of epigenetics in sex determination, maintenance and plasticity, from plants to humans. In our previous work we reported a transgenerational feminization of a zebrafish population for which the first generation was exposed to cadmium, a metal with endocrine disrupting effects. In this study, starting from the previously performed whole methylome analysis, we focused on the zbtb38 gene and hypothesized that it could be involved in sex differentiation and Cd-induced offspring feminization. We observed sex-specific patterns of both DNA methylation and RNA transcription levels of zbtb38. We also discovered that the non-coding exon 3 of zbtb38 encodes for a natural antisense transcript (NAT). The activity of this NAT was found to be influenced by both genetic and environmental factors. Furthermore, increasing transcription levels of this NAT in parental gametes was highly correlated with offspring sex ratios. Since zbtb38 itself encodes for a transcription factor that binds methylated DNA, our results support a non-negligible role of zbtb38 not only in orchestrating the sex-specific transcriptome (i.e. sex differentiation) but also, via its NAT, offspring sex ratios.< Leer menos
Palabras clave en inglés
Sex determination
epigenetics
offspring sex ratio
environment
transgenerational
pollutant
Proyecto ANR
Effets transgénérationnels des polluants chez les poissons: l'épigénétique et son implication en écotoxicologie - ANR-16-CE34-0008
Centros de investigación