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Three-level representation of metabolic networks
| hal.structure.identifier | Models and Algorithms for the Genome [MAGNOME] | |
| hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
| dc.contributor.author | ZHUKOVA, Anna | |
| hal.structure.identifier | Models and Algorithms for the Genome [MAGNOME] | |
| dc.contributor.author | SHERMAN, David James | |
| dc.date.accessioned | 2024-04-15T09:57:56Z | |
| dc.date.available | 2024-04-15T09:57:56Z | |
| dc.date.created | 2014-11-05 | |
| dc.date.conference | 2014-11-04 | |
| dc.identifier.uri | https://oskar-bordeaux.fr/handle/20.500.12278/198956 | |
| dc.description.abstractEn | The complexity of genome-scale metabolic models makes them quite difficult for human users to read, since they contain thousands of reactions that must be included for accurate computer simulation. The web-based navigation system Mimoza allows a human expert to explore metabolic network models in a semantically zoomable manner: The most general view represents the compartments of the model; the next view shows the generalized versions of reactions and metabolites in each compartment; and the most detailed view represents the initial network with the generalization-based layout (where similar metabolites and reactions are placed next to each other). It allows a human expert to grasp the general structure of the network and analyze it in a top-down manner. | |
| dc.language.iso | en | |
| dc.subject.en | Metabolic modeling | |
| dc.subject.en | model generalization | |
| dc.subject.en | visualization | |
| dc.title.en | Three-level representation of metabolic networks | |
| dc.type | Autre communication scientifique (congrès sans actes - poster - séminaire...) | |
| dc.subject.hal | Informatique [cs]/Bio-informatique [q-bio.QM] | |
| bordeaux.hal.laboratories | Laboratoire Bordelais de Recherche en Informatique (LaBRI) - UMR 5800 | * |
| bordeaux.institution | Université de Bordeaux | |
| bordeaux.institution | Bordeaux INP | |
| bordeaux.institution | CNRS | |
| bordeaux.conference.title | Journées EDMI | |
| bordeaux.country | FR | |
| bordeaux.conference.city | Bordeaux | |
| bordeaux.peerReviewed | non | |
| hal.identifier | hal-01081711 | |
| hal.version | 1 | |
| hal.invited | non | |
| hal.proceedings | non | |
| hal.conference.end | 2014-11-05 | |
| hal.popular | non | |
| hal.audience | Nationale | |
| hal.origin.link | https://hal.archives-ouvertes.fr//hal-01081711v1 | |
| bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.au=ZHUKOVA,%20Anna&SHERMAN,%20David%20James&rft.genre=conference |
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