hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | SOUCIET, Jean-Luc | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | DUJON, Bernard | |
hal.structure.identifier | Microbiologie et Génétique Moléculaire [MGM] | |
dc.contributor.author | GAILLARDIN, Claude | |
hal.structure.identifier | Department of Genetics [Saint-Louis] | |
dc.contributor.author | JOHNSTON, Mark | |
hal.structure.identifier | Université Catholique de Louvain = Catholic University of Louvain [UCL] | |
dc.contributor.author | BARET, Philippe V | |
hal.structure.identifier | Department of Biology [Utah] | |
dc.contributor.author | CLIFTEN, Paul | |
hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
dc.contributor.author | SHERMAN, David James | |
hal.structure.identifier | Structure et évolution des génomes - UMR 8030 [SEG] | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | WEISSENBACH, Jean | |
hal.structure.identifier | Architecture et Réactivité de l'ARN [ARN] | |
dc.contributor.author | WESTHOF, Eric | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
hal.structure.identifier | Institut de Génomique d'Evry [IG] | |
dc.contributor.author | WINCKER, Patrick | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | JUBIN, Claire | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | POULAIN, Julie | |
hal.structure.identifier | Structure et évolution des génomes - UMR 8030 [SEG] | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | BARBE, Valerie | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | SÉGURENS, Béatrice | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | ARTIGUENAVE, François | |
hal.structure.identifier | Structure et évolution des génomes - UMR 8030 [SEG] | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | ANTHOUARD, Véronique | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | VACHERIE, Benoit | |
hal.structure.identifier | Genoscope - Centre national de séquençage [Evry] [GENOSCOPE] | |
dc.contributor.author | VAL, Marie-Eve | |
hal.structure.identifier | Department of Genetics [Saint-Louis] | |
dc.contributor.author | FULTON, Robert S | |
hal.structure.identifier | Department of Genetics [Saint-Louis] | |
dc.contributor.author | MINX, Patrick | |
hal.structure.identifier | Department of Genetics [Saint-Louis] | |
dc.contributor.author | WILSON, Richard | |
hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
dc.contributor.author | DURRENS, Pascal | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
dc.contributor.author | JEAN, Geraldine | |
hal.structure.identifier | Institut de Biologie et de Technologies de Saclay [IBITECS] | |
dc.contributor.author | MARCK, Christian | |
hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
hal.structure.identifier | Modèles et algorithmes pour la Bioinformatique et la Visualisation d'informations; [MABIOVIS] | |
dc.contributor.author | MARTIN, Tiphaine | |
hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
dc.contributor.author | NIKOLSKI, Macha | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | ROLLAND, Thomas | |
hal.structure.identifier | Université Catholique de Louvain = Catholic University of Louvain [UCL] | |
dc.contributor.author | SERET, Marie-Line | |
hal.structure.identifier | Microbiologie et Génétique Moléculaire [MGM] | |
dc.contributor.author | CASAREGOLA, Serge | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | DESPONS, Laurence | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | FAIRHEAD, Cecile | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | FISCHER, Gilles | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | LAFONTAINE, Ingrid | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | LEH, Veronique | |
hal.structure.identifier | Microbiologie, adaptation et pathogénie [MAP] | |
dc.contributor.author | LEMAIRE, Marc | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | DE MONTIGNY, Jacky | |
hal.structure.identifier | Microbiologie et Génétique Moléculaire [MGM] | |
dc.contributor.author | NEUVÉGLISE, Cécile | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | THIERRY, Agnes | |
hal.structure.identifier | Microbiologie et Génétique Moléculaire [MGM] | |
dc.contributor.author | BLANC-LENFLE, Isabelle | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | BLEYKASTEN, Claudine | |
hal.structure.identifier | Université Catholique de Louvain = Catholic University of Louvain [UCL] | |
dc.contributor.author | DIFFELS, Julie | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | FRITSCH, Emilie | |
hal.structure.identifier | Génomique (Plate-Forme) - Genomics Platform | |
dc.contributor.author | FRANGEUL, Lionel | |
hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
dc.contributor.author | GOEFFON, Adrien | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | JAUNIAUX, Nicolas | |
hal.structure.identifier | Architecture et Réactivité de l'ARN [ARN] | |
dc.contributor.author | KACHOURI-LAFOND, Rym | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | PAYEN, Celia | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | POTIER, Serge | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
hal.structure.identifier | Department of Membrane Transport [Prague] | |
dc.contributor.author | PRIBYLOVA, Lenka | |
hal.structure.identifier | Microbiologie et Génétique Moléculaire [MGM] | |
dc.contributor.author | OZANNE, Christophe | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | RICHARD, Guy-Franck | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | SACERDOT, Christine | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | STRAUB, Marie-Laure | |
hal.structure.identifier | Laboratoire de chimie bactérienne [LCB] | |
dc.contributor.author | TALLA, Emmanuel | |
dc.date.accessioned | 2024-04-15T09:55:42Z | |
dc.date.available | 2024-04-15T09:55:42Z | |
dc.date.issued | 2009 | |
dc.identifier.issn | 1088-9051 | |
dc.identifier.uri | https://oskar-bordeaux.fr/handle/20.500.12278/198777 | |
dc.description.abstractEn | Our knowledge on yeast genomes remains largely dominated by the extensive studies on Saccharomyces cerevisiae and the consequences of its ancestral duplication, leaving the evolution of the entire class of hemiascomycetes only partly explored. We concentrate here on five species of Saccharomycetaceae, a large subdivision of hemiascomycetes, that we call "protoploid" because they diverged from the S. cerevisiae lineage prior to its genome duplication. We determined the complete genome sequences of three of these species, Kluyveromyces (Lachancea) thermotolerans and Saccharomyces (Lachancea) kluyveri (two members of the newly described Lachancea clade) and Zygosaccharomyces rouxii. We included in our comparisons the previously available sequences of Klyveromyces lactis and Ashbya (Eremothecium) gossypii. Despite their broad evolutionary range and significant individual variations in each lineage, the five protoploid Saccharomycetaceae share a core repertoire of ca. 3,300 protein families and a high degree of conserved synteny. Synteny blocks were used to define gene orthology and to infer ancestors. Far from representing minimal genomes without redundancy, the five protoploid yeasts contain numerous copies of paralogous genes, either dispersed or in tandem arrays, that, altogether, constitute a third of each genome. Ancient, conserved paralogs as well as novel, lineage-specific paralogs were identified. | |
dc.description.sponsorship | How do genes arise ? Lessons and questions from the evolution of yeast genomes. - ANR-05-BLAN-0331 | |
dc.language.iso | en | |
dc.publisher | Cold Spring Harbor Laboratory Press | |
dc.title.en | Comparative genomics of protoploid Saccharomycetaceae | |
dc.type | Article de revue | |
dc.identifier.doi | 10.1101/gr.091546.109 | |
dc.subject.hal | Sciences du Vivant [q-bio]/Génétique | |
dc.subject.hal | Sciences du Vivant [q-bio]/Biodiversité | |
bordeaux.journal | Genome Research | |
bordeaux.page | 1696-1709 | |
bordeaux.volume | 19 | |
bordeaux.hal.laboratories | Laboratoire Bordelais de Recherche en Informatique (LaBRI) - UMR 5800 | * |
bordeaux.institution | Université de Bordeaux | |
bordeaux.institution | Bordeaux INP | |
bordeaux.institution | CNRS | |
bordeaux.peerReviewed | oui | |
hal.identifier | inria-00407511 | |
hal.version | 1 | |
hal.popular | non | |
hal.audience | Internationale | |
hal.origin.link | https://hal.archives-ouvertes.fr//inria-00407511v1 | |
bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Genome%20Research&rft.date=2009&rft.volume=19&rft.spage=1696-1709&rft.epage=1696-1709&rft.eissn=1088-9051&rft.issn=1088-9051&rft.au=SOUCIET,%20Jean-Luc&DUJON,%20Bernard&GAILLARDIN,%20Claude&JOHNSTON,%20Mark&BARET,%20Philippe%20V&rft.genre=article | |