Pipeline to detect the positional and directional relationship between transposable elements and adjacent genes in host genome
Idioma
en
Article de revue
Este ítem está publicado en
Peer Community Journal. 2021, vol. 1, p. e48
Peer Community In
Resumen en inglés
Understanding the relationship between transposable elements (TEs) and their closest positional genes in the host genome is a key point to explore their potential role in genome evolution. Transposable elements can regulate ...Leer más >
Understanding the relationship between transposable elements (TEs) and their closest positional genes in the host genome is a key point to explore their potential role in genome evolution. Transposable elements can regulate and affect gene expression not only because of their mobility within the genome but also because of their transcriptional activity. A comprehensive knowledge of structural organization between transposable elements and neighboring genes is important to study TE functional role in gene regulation. We implemented a pipeline which is capable to reveal the positional and directional relationship between TEs and adjacent gene distribution in the host genome.< Leer menos
Palabras clave en inglés
Transposable element
Gene
Genome
Bioinformatics
Pipeline
Orígen
Importado de HalCentros de investigación