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hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorMEGUERDITCHIAN, Caroline
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorERGUN, Ayse
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorDECROOCQ, Véronique
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorLEFEBVRE, Marie
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorBUI, Quynh-Trang
dc.date.issued2021
dc.identifier.issn2804-3871
dc.description.abstractEnUnderstanding the relationship between transposable elements (TEs) and their closest positional genes in the host genome is a key point to explore their potential role in genome evolution. Transposable elements can regulate and affect gene expression not only because of their mobility within the genome but also because of their transcriptional activity. A comprehensive knowledge of structural organization between transposable elements and neighboring genes is important to study TE functional role in gene regulation. We implemented a pipeline which is capable to reveal the positional and directional relationship between TEs and adjacent gene distribution in the host genome.
dc.language.isoen
dc.publisherPeer Community In
dc.rights.urihttp://creativecommons.org/licenses/by/
dc.subject.enTransposable element
dc.subject.enGene
dc.subject.enGenome
dc.subject.enBioinformatics
dc.subject.enPipeline
dc.title.enPipeline to detect the positional and directional relationship between transposable elements and adjacent genes in host genome
dc.typeArticle de revue
dc.identifier.doi10.24072/pcjournal.57
dc.subject.halSciences du Vivant [q-bio]
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie
dc.subject.halSciences du Vivant [q-bio]/Bio-Informatique, Biologie Systémique [q-bio.QM]
bordeaux.journalPeer Community Journal
bordeaux.pagee48
bordeaux.volume1
bordeaux.peerReviewedoui
hal.identifierhal-03604056
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-03604056v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Peer%20Community%20Journal&rft.date=2021&rft.volume=1&rft.spage=e48&rft.epage=e48&rft.eissn=2804-3871&rft.issn=2804-3871&rft.au=MEGUERDITCHIAN,%20Caroline&ERGUN,%20Ayse&DECROOCQ,%20V%C3%A9ronique&LEFEBVRE,%20Marie&BUI,%20Quynh-Trang&rft.genre=article


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