SEBBENN, Alexandre M.; BLANC-JOLIVET, Celine; MADER, Malte; MEYER-SAND, Barbara R. V.; PAREDES-VILLANUEVA, Kathelyn; HONORIO CORONADO, Eurídice N.; GARCÍA-DÁVILA, Carmen R.; TYSKLIND, Niklas; TROISPOUX, Valérie; DELCAMP, Adline; DEGEN, Bernd

doi:10.1007/s12686-019-01097-9

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Licencia de uso del documento

SEBBENN, Alexandre M.
Instituto Florestal de São Paulo

BLANC-JOLIVET, Celine
Thünen Institute of Forest Genetics

MADER, Malte
Thünen Institute of Forest Genetics

Idioma

Article de revue

Este ítem está publicado en

Conservation Genetics Resources. 2019, vol. 11, n° 3, p. 341-343

Springer

Resumen en inglés

Nuclear and plastidial single nucleotide polymorphism (SNP) and INDEL markers were developed using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing for population genetics and timber tracking purposes in the Neotropical timber species Jacaranda copaia. We used 407 nuclear SNPs, 29 chloroplast, and 31 mitochondrial loci to genotype 92 individuals from Brazil, Bolivia, French Guiana, and Peru. Based on high amplification rates and genetic differentiation among populations, 113 nuclear SNPs, 11 chloroplast, and 4 mitochondrial loci were selected, and their use validated for genetic tracking of timber origin.< Leer menos

Palabras clave en inglés

DNA-fingerprints

geographical origin

MiSeq

RADSeq

tropical timber

massARRAY

Jacaranda copaia

DOI

http://dx.doi.org/10.1007/s12686-019-01097-9

Proyecto ANR

Plateforme d'Innovation " Forêt-Bois-Fibre-Biomasse du Futur " - ANR-10-EQPX-0016
CEnter of the study of Biodiversity in Amazonia

Orígen

Importado de Hal

Centros de investigación

BioGeCo (Biodiversité Gènes & Communautés) - UMR 1202