Development of a set of SNP markers for population genetics of the red gorgonian (Paramuricea clavata), an emblematic species of the Mediterranean coralligenous
Langue
en
Article de revue
Ce document a été publié dans
Conservation Genetics Resources. 2020-03-04, vol. 12, n° 4, p. 521-523
Springer
Résumé en anglais
Transcriptome sequencing was used for the development of single nucleotide polymorphisms (SNP) for the red gorgonian (Paramuricea clavata). A total of 20,736 SNPs were identified, and 1718 had a coverage of over 100 reads. ...Lire la suite >
Transcriptome sequencing was used for the development of single nucleotide polymorphisms (SNP) for the red gorgonian (Paramuricea clavata). A total of 20,736 SNPs were identified, and 1718 had a coverage of over 100 reads. Of the 480 SNPs tested, 347 SNPs were successfully genotyped at 95 samples from the NW Mediterranean using a MassARRAY System. This set of markers will be of great value for population genetics and phylogeography.< Réduire
Mots clés en anglais
Paramuricea clavata
Single nucleotide polymorphism
MassARRAY
Project ANR
Plateforme d'Innovation " Forêt-Bois-Fibre-Biomasse du Futur " - ANR-10-EQPX-0016
Origine
Importé de halUnités de recherche