Development of a set of SNP markers for population genetics of the red gorgonian (Paramuricea clavata), an emblematic species of the Mediterranean coralligenous
| hal.structure.identifier | Laboratoire d'Ecogéochimie des environnements benthiques [LECOB] | |
| dc.contributor.author | PADRÓN, M. | |
| hal.structure.identifier | Génome et Transcriptome - Plateforme Génomique [GeT-PlaGe] | |
| dc.contributor.author | MILHES, M. | |
| hal.structure.identifier | Biodiversité, Gènes & Communautés [BioGeCo] | |
| dc.contributor.author | MASSOT, M. | |
| hal.structure.identifier | Biodiversité, Gènes & Communautés [BioGeCo] | |
| dc.contributor.author | GUICHOUX, E. | |
| dc.date.issued | 2020-03-04 | |
| dc.identifier.issn | 1877-7252 | |
| dc.description.abstractEn | Transcriptome sequencing was used for the development of single nucleotide polymorphisms (SNP) for the red gorgonian (Paramuricea clavata). A total of 20,736 SNPs were identified, and 1718 had a coverage of over 100 reads. Of the 480 SNPs tested, 347 SNPs were successfully genotyped at 95 samples from the NW Mediterranean using a MassARRAY System. This set of markers will be of great value for population genetics and phylogeography. | |
| dc.description.sponsorship | Plateforme d'Innovation " Forêt-Bois-Fibre-Biomasse du Futur " - ANR-10-EQPX-0016 | |
| dc.language.iso | en | |
| dc.publisher | Springer | |
| dc.subject.en | Paramuricea clavata | |
| dc.subject.en | Single nucleotide polymorphism | |
| dc.subject.en | MassARRAY | |
| dc.title.en | Development of a set of SNP markers for population genetics of the red gorgonian (Paramuricea clavata), an emblematic species of the Mediterranean coralligenous | |
| dc.type | Article de revue | |
| dc.identifier.doi | 10.1007/s12686-020-01139-7 | |
| dc.subject.hal | Planète et Univers [physics]/Sciences de la Terre | |
| bordeaux.journal | Conservation Genetics Resources | |
| bordeaux.page | 521-523 | |
| bordeaux.volume | 12 | |
| bordeaux.issue | 4 | |
| bordeaux.peerReviewed | oui | |
| hal.identifier | hal-03019888 | |
| hal.version | 1 | |
| hal.popular | non | |
| hal.audience | Internationale | |
| hal.origin.link | https://hal.archives-ouvertes.fr//hal-03019888v1 | |
| bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Conservation%20Genetics%20Resources&rft.date=2020-03-04&rft.volume=12&rft.issue=4&rft.spage=521-523&rft.epage=521-523&rft.eissn=1877-7252&rft.issn=1877-7252&rft.au=PADR%C3%93N,%20M.&MILHES,%20M.&MASSOT,%20M.&GUICHOUX,%20E.&rft.genre=article |
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