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A Gondwanan imprint on global diversity and domestication of wine and cider yeast Saccharomyces uvarum.

hal.structure.identifierCentro de Recursos Microbiológicos (CREM), Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia
dc.contributor.authorALMEIDA, Pedro
hal.structure.identifierCICECO
dc.contributor.authorGONÇALVES, Carla
hal.structure.identifierLaboratoire Environnement Profond [LEP]
dc.contributor.authorTEIXEIRA, Sara
hal.structure.identifierInstituto Nacional de Investigaciones en Biodiversidad y Medioambiente [Bariloche] [INIBIOMA-CONICET]
dc.contributor.authorLIBKIND, Diego
hal.structure.identifierUniversity of Wisconsin-Madison
dc.contributor.authorBONTRAGER, Martin
hal.structure.identifierFaculté d'Oenologie [Bordeaux II]
dc.contributor.authorMASNEUF-POMARÈDE, Isabelle
hal.structure.identifierGénétique Quantitative et Evolution - Le Moulon (Génétique Végétale) [GQE-Le Moulon]
dc.contributor.authorALBERTIN, Warren
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
hal.structure.identifierModels and Algorithms for the Genome [ MAGNOME]
dc.contributor.authorDURRENS, Pascal
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
hal.structure.identifierModels and Algorithms for the Genome [ MAGNOME]
dc.contributor.authorSHERMAN, David James
hal.structure.identifierFaculté d'Oenologie [Bordeaux II]
dc.contributor.authorMARULLO, Philippe
hal.structure.identifierUniversity of Wisconsin-Madison
dc.contributor.authorTODD HITTINGER, Chris
hal.structure.identifierCentro de Recursos Microbiológicos (CREM), Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia
dc.contributor.authorGONÇALVES, Paula
hal.structure.identifierCentro de Recursos Microbiológicos (CREM), Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia
dc.contributor.authorSAMPAIO, José Paulo
dc.date.accessioned2024-04-15T09:58:17Z
dc.date.available2024-04-15T09:58:17Z
dc.date.issued2014
dc.identifier.issn2041-1723
dc.identifier.urihttps://oskar-bordeaux.fr/handle/20.500.12278/198988
dc.description.abstractEnIn addition to Saccharomyces cerevisiae, the cryotolerant yeast species S. uvarum is also used for wine and cider fermentation but nothing is known about its natural history. Here we use a population genomics approach to investigate its global phylogeography and domestication fingerprints using a collection of isolates obtained from fermented beverages and from natural environments on five continents. South American isolates contain more genetic diversity than that found in the Northern Hemisphere. Moreover, coalescence analyses suggest that a Patagonian sub-population gave rise to the Holarctic population through a recent bottleneck. Holarctic strains display multiple introgressions from other Saccharomyces species, those from S. eubayanus being prevalent in European strains associated with human-driven fermentations. These introgressions are absent in the large majority of wild strains and gene ontology analyses indicate that several gene categories relevant for wine fermentation are overrepresented. Such findings constitute a first indication of domestication in S. uvarum.
dc.language.isoen
dc.publisherNature Publishing Group
dc.title.enA Gondwanan imprint on global diversity and domestication of wine and cider yeast Saccharomyces uvarum.
dc.typeArticle de revue
dc.identifier.doi10.1038/ncomms5044
dc.subject.halInformatique [cs]/Bio-informatique [q-bio.QM]
dc.subject.halSciences du Vivant [q-bio]/Bio-Informatique, Biologie Systémique [q-bio.QM]
dc.subject.halSciences du Vivant [q-bio]/Biodiversité
bordeaux.journalNature Communications
bordeaux.page4044
bordeaux.volume5
bordeaux.hal.laboratoriesLaboratoire Bordelais de Recherche en Informatique (LaBRI) - UMR 5800*
bordeaux.institutionUniversité de Bordeaux
bordeaux.institutionBordeaux INP
bordeaux.institutionCNRS
bordeaux.peerReviewedoui
hal.identifierhal-01002466
hal.version1
hal.popularnon
hal.audienceInternationale
dc.subject.itGenetics
dc.subject.itEvolution
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-01002466v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Nature%20Communications&rft.date=2014&rft.volume=5&rft.spage=4044&rft.epage=4044&rft.eissn=2041-1723&rft.issn=2041-1723&rft.au=ALMEIDA,%20Pedro&GON%C3%87ALVES,%20Carla&TEIXEIRA,%20Sara&LIBKIND,%20Diego&BONTRAGER,%20Martin&rft.genre=article


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