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Towards an open grapevine information system

hal.structure.identifierUnité de Recherche Génomique Info [URGI]
dc.contributor.authorADAM-BLONDON, Anne-Françoise
hal.structure.identifierUnité de Recherche Génomique Info [URGI]
dc.contributor.authorALAUX, Michael
hal.structure.identifierUnité de Recherche Génomique Info [URGI]
dc.contributor.authorPOMMIER, Cyril
hal.structure.identifierUniversity of California [UC]
dc.contributor.authorCANTU, D
hal.structure.identifierThe University of Tennessee [Knoxville]
dc.contributor.authorCHENG, Z-M
hal.structure.identifierUniversity of Nevada [Reno]
dc.contributor.authorCRAMER, Gr
hal.structure.identifierCommonwealth Scientific and Industrial Research Organisation [Canberra] [CSIRO]
dc.contributor.authorDAVIES, C
hal.structure.identifierEcophysiologie et Génomique Fonctionnelle de la Vigne [UMR EGFV]
dc.contributor.authorDELROT, Serge
hal.structure.identifierOregon State University [OSU]
dc.contributor.authorDELUC, L
hal.structure.identifierIstituto di Genomica Applicata [IGA]
dc.contributor.authorGASPERO, G Di
hal.structure.identifierUniversidad de La Rioja [UR]
dc.contributor.authorGRIMPLET, J
hal.structure.identifierSouth Dakota State University [SDSTATE]
dc.contributor.authorFENNELL, A
hal.structure.identifierUnited States Department of Agriculture [USDA]
dc.contributor.authorLONDO, Jp
hal.structure.identifierEuropean Bioinformatics Institute [Cambridge, UK]
dc.contributor.authorKERSEY, P
hal.structure.identifierFondazione Edmund Mach - Edmund Mach Foundation [Italie] [FEM]
dc.contributor.authorMATTIVI, F
hal.structure.identifierOregon State University [OSU]
dc.contributor.authorNAITHANI, S
hal.structure.identifierMathématiques, Informatique et STatistique pour l'Environnement et l'Agronomie [MISTEA]
dc.contributor.authorNEVEU, Pascal
hal.structure.identifierCentre de Bioinformatique de Bordeaux [CBIB]
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
dc.contributor.authorNIKOLSKI, M
hal.structure.identifierUniversità degli studi di Verona = University of Verona [UNIVR]
dc.contributor.authorPEZZOTTI, M
hal.structure.identifierCornell University [New York]
dc.contributor.authorREISCH, Bi
hal.structure.identifierInstitute for grapevine breeding Geilweilerhof [IRZ]
dc.contributor.authorTÖPFER, R
hal.structure.identifierStellenbosch University
dc.contributor.authorVIVIER, Ma
hal.structure.identifierCold Spring Harbor Laboratory [CSHL]
hal.structure.identifierCornell University [New York]
dc.contributor.authorWARE, D
hal.structure.identifierUnité de Recherche Génomique Info [URGI]
dc.contributor.authorQUESNEVILLE, Hadi
dc.date.accessioned2024-04-15T09:56:35Z
dc.date.available2024-04-15T09:56:35Z
dc.date.issued2016
dc.identifier.issn2052-7276
dc.identifier.urihttps://oskar-bordeaux.fr/handle/20.500.12278/198850
dc.description.abstractEnViticulture, like other fields of agriculture, is currently facing important challenges that will be addressed only through sustained, dedicated and coordinated research. Although the methods used in biology have evolved tremendously in recent years and now involve the routine production of large data sets of varied nature, in many domains of study, including grapevine research, there is a need to improve the findability, accessibility, interoperability and reusability (FAIR-ness) of these data. Considering the heterogeneous nature of the data produced, the transnational nature of the scientific community and the experience gained elsewhere, we have formed an open working group, in the framework of the International Grapevine Genome Program (www.vitaceae.org), to construct a coordinated federation of information systems holding grapevine data distributed around the world, providing an integrated set of interfaces supporting advanced data modeling, rich semantic integration and the next generation of data mining tools. To achieve this goal, it will be critical to develop, implement and adopt appropriate standards for data annotation and formatting. The development of this system, the GrapeIS, linking genotypes to phenotypes, and scientific research to agronomical and oeneological data, should provide new insights into grape biology, and allow the development of new varieties to meet the challenges of biotic and abiotic stress, environmental change, and consumer demand.
dc.language.isoen
dc.publisherNature Publishing Group
dc.subjectanalyse de génome
dc.subjectvitis vinifera
dc.subjectviticulture
dc.title.enTowards an open grapevine information system
dc.typeArticle de revue
dc.typeArticle de synthèse
dc.identifier.doi10.1038/hortres.2016.56
dc.subject.halInformatique [cs]/Bio-informatique [q-bio.QM]
bordeaux.journalHorticulture research
bordeaux.page16056
bordeaux.volume3
bordeaux.hal.laboratoriesLaboratoire Bordelais de Recherche en Informatique (LaBRI) - UMR 5800*
bordeaux.institutionUniversité de Bordeaux
bordeaux.institutionBordeaux INP
bordeaux.institutionCNRS
bordeaux.peerReviewedoui
hal.identifierhal-01404714
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-01404714v1
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