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Genolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes.

hal.structure.identifierModels and Algorithms for the Genome [MAGNOME]
hal.structure.identifierCentre de Bioinformatique de Bordeaux [CBIB]
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
dc.contributor.authorSHERMAN, David James
hal.structure.identifierModels and Algorithms for the Genome [MAGNOME]
hal.structure.identifierModèles et algorithmes pour la Bioinformatique et la Visualisation d'informations; [MABIOVIS]
dc.contributor.authorMARTIN, Tiphaine
hal.structure.identifierModels and Algorithms for the Genome [MAGNOME]
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
dc.contributor.authorNIKOLSKI, Macha
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
dc.contributor.authorCAYLA, Cyril
hal.structure.identifierDynamique, évolution et expression de génomes de microorganismes [DEEGM]
hal.structure.identifierGénétique moléculaire, génomique, microbiologie [GMGM]
dc.contributor.authorSOUCIET, Jean-Luc
hal.structure.identifierModels and Algorithms for the Genome [MAGNOME]
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
dc.contributor.authorDURRENS, Pascal
dc.date.accessioned2024-04-15T09:53:39Z
dc.date.available2024-04-15T09:53:39Z
dc.date.issued2009
dc.identifier.issn0305-1048
dc.identifier.urihttps://oskar-bordeaux.fr/handle/20.500.12278/198619
dc.description.abstractEnThe Genolevures online database (http://cbi.labri.fr/Genolevures/ and http://genolevures.org/) provides exploratory tools and curated data sets relative to nine complete and seven partial genome sequences determined and manually annotated by the Genolevures Consortium, to facilitate comparative genomic studies of Hemiascomycete yeasts. The 2008 update to the Genolevures database provides four new genomes in complete (subtelomere to subtelomere) chromosome sequences, 50 000 protein-coding and tRNA genes, and in silico analyses for each gene element. A key element is a novel classification of conserved multi-species protein families and their use in detecting synteny, gene fusions and other aspects of genome remodeling in evolution. Our purpose is to release high-quality curated data from complete genomes, with a focus on the relations between genes, genomes and proteins.
dc.language.isoen
dc.publisherOxford University Press
dc.title.enGenolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes.
dc.typeArticle de revue
dc.identifier.doi10.1093/nar/gkn859
dc.subject.halInformatique [cs]/Bio-informatique [q-bio.QM]
dc.subject.halSciences du Vivant [q-bio]/Bio-Informatique, Biologie Systémique [q-bio.QM]
bordeaux.journalNucleic Acids Research
bordeaux.pageD550-D554
bordeaux.hal.laboratoriesLaboratoire Bordelais de Recherche en Informatique (LaBRI) - UMR 5800*
bordeaux.issue37
bordeaux.institutionUniversité de Bordeaux
bordeaux.institutionBordeaux INP
bordeaux.institutionCNRS
bordeaux.peerReviewedoui
hal.identifierinria-00341578
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//inria-00341578v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Nucleic%20Acids%20Research&rft.date=2009&rft.issue=37&rft.spage=D550-D554&rft.epage=D550-D554&rft.eissn=0305-1048&rft.issn=0305-1048&rft.au=SHERMAN,%20David%20James&MARTIN,%20Tiphaine&NIKOLSKI,%20Macha&CAYLA,%20Cyril&SOUCIET,%20Jean-Luc&rft.genre=article


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