Modeling Stochastic Switched Systems with BioRica
| hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
| dc.contributor.author | ASSAR, Rodrigo | |
| hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
| dc.contributor.author | GARCIA, Alice | |
| hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
| hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
| dc.contributor.author | SHERMAN, David James | |
| dc.date.accessioned | 2024-04-15T09:47:01Z | |
| dc.date.available | 2024-04-15T09:47:01Z | |
| dc.date.created | 2011-07-02 | |
| dc.date.issued | 2011-07-01 | |
| dc.date.conference | 2011-06-28 | |
| dc.identifier.uri | https://oskar-bordeaux.fr/handle/20.500.12278/198058 | |
| dc.description.abstractEn | Modeling physycal and biological dynamic systems needs to combine different types of models in a non-ambiguous way. We present an approach to integrate continuous, discrete, stochastic, deterministic and non-deterministic elements by using Transition Systems theory, reuse, composition of models, and the framework BioRica. The systems are described by interacting con- tinuous and discrete models, and in addition continuous models are decomposed into two compo- nents: controlled and controller model. We define Stochastic Switched Systems whose continuous dynamics is modeled by differential equations and its discrete dynamics by transition systems, al- lowing stochastic and non-deterministic behaviours. We illustrated the use of our approach with examples of intrinsically and approximated hybrid systems. Our approach allows us to give a first step to integrate and to extend models of complex systems, such as cell differentiation. | |
| dc.language.iso | en | |
| dc.subject.en | Hybrid Systems | |
| dc.subject.en | Transition Systems | |
| dc.subject.en | Switched Systems | |
| dc.subject.en | Cell differentiation | |
| dc.title.en | Modeling Stochastic Switched Systems with BioRica | |
| dc.type | Communication dans un congrès | |
| dc.subject.hal | Informatique [cs]/Bio-informatique [q-bio.QM] | |
| dc.subject.hal | Sciences du Vivant [q-bio]/Bio-Informatique, Biologie Systémique [q-bio.QM] | |
| bordeaux.page | 297--304 | |
| bordeaux.hal.laboratories | Laboratoire Bordelais de Recherche en Informatique (LaBRI) - UMR 5800 | * |
| bordeaux.institution | Université de Bordeaux | |
| bordeaux.institution | Bordeaux INP | |
| bordeaux.institution | CNRS | |
| bordeaux.conference.title | Journées Ouvertes en Biologie, Informatique et Mathématiques JOBIM 2011 | |
| bordeaux.country | FR | |
| bordeaux.conference.city | Paris | |
| bordeaux.peerReviewed | oui | |
| hal.identifier | inria-00617419 | |
| hal.version | 1 | |
| hal.invited | non | |
| hal.proceedings | oui | |
| hal.conference.organizer | Institut Pasteur | |
| hal.conference.end | 2011-07-01 | |
| hal.popular | non | |
| hal.audience | Nationale | |
| hal.origin.link | https://hal.archives-ouvertes.fr//inria-00617419v1 | |
| bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.date=2011-07-01&rft.spage=297--304&rft.epage=297--304&rft.au=ASSAR,%20Rodrigo&GARCIA,%20Alice&SHERMAN,%20David%20James&rft.genre=unknown |
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