hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
hal.structure.identifier | Yeast Genetics | |
dc.contributor.author | KUNZE, Gotthard | |
hal.structure.identifier | MICrobiologie de l'ALImentation au Service de la Santé [MICALIS] | |
dc.contributor.author | GAILLARDIN, Claude | |
hal.structure.identifier | Institute of Plant Biology and Biotechnology | |
dc.contributor.author | CZERNICKA, Małgorzata | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
dc.contributor.author | DURRENS, Pascal | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
dc.contributor.author | MARTIN, Tiphaine | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | BÖER, Erik | |
hal.structure.identifier | Bioinformatics and Genomics Programme | |
hal.structure.identifier | Universitat Pompeu Fabra [Barcelona] [UPF] | |
dc.contributor.author | GABALDÓN, Toni | |
hal.structure.identifier | Architecture et Réactivité de l'ARN [ARN] | |
dc.contributor.author | CRUZ, Jose | |
hal.structure.identifier | Laboratoire de chimie bactérienne [LCB] | |
dc.contributor.author | TALLA, Emmanuel | |
hal.structure.identifier | Institut de Biologie et de Technologies de Saclay [IBITECS] | |
dc.contributor.author | MARCK, Christian | |
hal.structure.identifier | Université Catholique de Louvain = Catholic University of Louvain [UCL] | |
dc.contributor.author | GOFFEAU, André | |
hal.structure.identifier | Institut de Génomique d'Evry [IG] | |
dc.contributor.author | BARBE, Valérie | |
hal.structure.identifier | Earth and Life Institute [Louvain-La-Neuve] [ELI] | |
dc.contributor.author | BARET, Philippe | |
hal.structure.identifier | School of Biological Sciences | |
dc.contributor.author | BARONIAN, Keith | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | BEIER, Sebastian | |
hal.structure.identifier | Architecture et Réactivité de l'ARN [ARN] | |
dc.contributor.author | BLEYKASTEN, Claudine | |
hal.structure.identifier | Institute of Biochemistry | |
dc.contributor.author | BODE, Rüdiger | |
hal.structure.identifier | MICrobiologie de l'ALImentation au Service de la Santé [MICALIS] | |
dc.contributor.author | CASAREGOLA, Serge | |
hal.structure.identifier | Université de Strasbourg [UNISTRA] | |
dc.contributor.author | DESPONS, Laurence | |
hal.structure.identifier | Institut de génétique et microbiologie [Orsay] [IGM] | |
dc.contributor.author | FAIRHEAD, Cécile | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | GIERSBERG, Martin | |
hal.structure.identifier | Laboratory of Bioinformatics and Protein Engineering | |
dc.contributor.author | GIERSKI, Przemysław Piotr | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | HÄHNEL, Urs | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | HARTMANN, Anja | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | JANKOWSKA, Dagmara | |
hal.structure.identifier | Génomique métabolique [UMR 8030] | |
dc.contributor.author | JUBIN, Claire | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | JUNG, Paul | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | LAFONTAINE, Ingrid | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | LEH-LOUIS, Véronique | |
hal.structure.identifier | Génétique moléculaire des levures [YMG] | |
dc.contributor.author | LEMAIRE, Marc | |
hal.structure.identifier | Bioinformatics and Genomics Programme | |
hal.structure.identifier | Universitat Pompeu Fabra [Barcelona] [UPF] | |
dc.contributor.author | MARCET-HOUBEN, Marina | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | MASCHER, Martin | |
hal.structure.identifier | MICrobiologie de l'ALImentation au Service de la Santé [MICALIS] | |
dc.contributor.author | MOREL, Guillaume | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | RICHARD, Guy-Franck | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | RIECHEN, Jan | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | SACERDOT, Christine | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
dc.contributor.author | SARKAR, Anasua | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
dc.contributor.author | SAVEL, Guilhem | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | SCHACHERER, Joseph | |
hal.structure.identifier | Laboratoire Bordelais de Recherche en Informatique [LaBRI] | |
hal.structure.identifier | Models and Algorithms for the Genome [ MAGNOME] | |
dc.contributor.author | SHERMAN, David | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | STEIN, Nils | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | STRAUB, Marie-Laure | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | THIERRY, Agnès | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | TRAUTWEIN-SCHULT, Anke | |
hal.structure.identifier | Institut de Génomique d'Evry [IG] | |
dc.contributor.author | VACHERIE, Benoit | |
hal.structure.identifier | Architecture et Réactivité de l'ARN [ARN] | |
dc.contributor.author | WESTHOF, Eric | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | WORCH, Sebastian | |
hal.structure.identifier | Génétique Moléculaire des Levures | |
dc.contributor.author | DUJON, Bernard | |
hal.structure.identifier | Génétique moléculaire, génomique, microbiologie [GMGM] | |
dc.contributor.author | SOUCIET, Jean-Luc | |
hal.structure.identifier | Institut de Génomique d'Evry [IG] | |
dc.contributor.author | WINCKER, Patrick | |
hal.structure.identifier | Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] [IPK-Gatersleben] | |
dc.contributor.author | SCHOLZ, Uwe | |
hal.structure.identifier | MICrobiologie de l'ALImentation au Service de la Santé [MICALIS] | |
dc.contributor.author | NEUVÉGLISE, Cécile | |
dc.date.accessioned | 2024-04-15T09:41:23Z | |
dc.date.available | 2024-04-15T09:41:23Z | |
dc.date.issued | 2014 | |
dc.identifier.issn | 1754-6834 | |
dc.identifier.uri | https://oskar-bordeaux.fr/handle/20.500.12278/197596 | |
dc.description.abstractEn | BACKGROUND: The industrially important yeast Blastobotrys (Arxula) adeninivorans is an asexual hemiascomycete phylogenetically very distant from Saccharomyces cerevisiae. Its unusual metabolic flexibility allows it to use a wide range of carbon and nitrogen sources, while being thermotolerant, xerotolerant and osmotolerant. RESULTS: The sequencing of strain LS3 revealed that the nuclear genome of A. adeninivorans is 11.8 Mb long and consists of four chromosomes with regional centromeres. Its closest sequenced relative is Yarrowia lipolytica, although mean conservation of orthologs is low. With 914 introns within 6116 genes, A. adeninivorans is one of the most intron-rich hemiascomycetes sequenced to date. Several large species-specific families appear to result from multiple rounds of segmental duplications of tandem gene arrays, a novel mechanism not yet described in yeasts. An analysis of the genome and its transcriptome revealed enzymes with biotechnological potential, such as two extracellular tannases (Atan1p and Atan2p) of the tannic-acid catabolic route, and a new pathway for the assimilation of n-butanol via butyric aldehyde and butyric acid. CONCLUSIONS: The high-quality genome of this species that diverged early in Saccharomycotina will allow further fundamental studies on comparative genomics, evolution and phylogenetics. Protein components of different pathways for carbon and nitrogen source utilization were identified, which so far has remained unexplored in yeast, offering clues for further biotechnological developments. In the course of identifying alternative microorganisms for biotechnological interest, A. adeninivorans has already proved its strengthened competitiveness as a promising cell factory for many more applications. | |
dc.language.iso | en | |
dc.publisher | BioMed Central | |
dc.subject | n-butanol | |
dc.subject | biotechnology | |
dc.subject.en | yeast | |
dc.subject.en | genome | |
dc.subject.en | tannic acid | |
dc.subject.en | metabolism | |
dc.title.en | The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest. | |
dc.type | Article de revue | |
dc.identifier.doi | 10.1186/1754-6834-7-66 | |
dc.subject.hal | Sciences du Vivant [q-bio]/Biotechnologies | |
dc.subject.hal | Informatique [cs]/Biotechnologie | |
bordeaux.journal | Biotechnology for Biofuels | |
bordeaux.page | 66 | |
bordeaux.volume | 7 | |
bordeaux.hal.laboratories | Laboratoire Bordelais de Recherche en Informatique (LaBRI) - UMR 5800 | * |
bordeaux.issue | 1 | |
bordeaux.institution | Université de Bordeaux | |
bordeaux.institution | Bordeaux INP | |
bordeaux.institution | CNRS | |
bordeaux.peerReviewed | oui | |
hal.identifier | pasteur-00988609 | |
hal.version | 1 | |
hal.popular | non | |
hal.audience | Internationale | |
hal.origin.link | https://hal.archives-ouvertes.fr//pasteur-00988609v1 | |
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