SSR-Based Analysis of Genetic Diversity and Structure of Sweet Cherry (Prunus avium L.) from 19 Countries in Europe
SCHÜLLER, Elisabeth
Universität für Bodenkultur Wien = University of Natural Resources and Life Sciences [Vienne, Autriche] [BOKU]
Universität für Bodenkultur Wien = University of Natural Resources and Life Sciences [Vienne, Autriche] [BOKU]
SPORNBERGER, Andreas
Universität für Bodenkultur Wien = University of Natural Resources and Life Sciences [Vienne, Autriche] [BOKU]
Universität für Bodenkultur Wien = University of Natural Resources and Life Sciences [Vienne, Autriche] [BOKU]
SIRBU, Sorina
Research Station for Viticulture and Enology Murfatlar, Calea Bucuresti, nr. 2, Murfatlar, Romania
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Research Station for Viticulture and Enology Murfatlar, Calea Bucuresti, nr. 2, Murfatlar, Romania
Langue
en
Article de revue
Ce document a été publié dans
Plants. 2021-09-23, vol. 10, p. 1983
MDPI
Résumé en anglais
Sweet cherry (Prunus avium L.) is a temperate fruit species whose production might be highly impacted by climate change in the near future. Diversity of plant material could be an option to mitigate these climate risks by ...Lire la suite >
Sweet cherry (Prunus avium L.) is a temperate fruit species whose production might be highly impacted by climate change in the near future. Diversity of plant material could be an option to mitigate these climate risks by enabling producers to have new cultivars well adapted to new environmental conditions. In this study, subsets of sweet cherry collections of 19 European countries were genotyped using 14 SSR. The objectives of this study were (i) to assess genetic diversity parameters, (ii) to estimate the levels of population structure, and (iii) to identify germplasm redundancies. A total of 314 accessions, including landraces, early selections, and modern cultivars, were monitored, and 220 unique SSR genotypes were identified. All 14 loci were confirmed to be polymorphic, and a total of 137 alleles were detected with a mean of 9.8 alleles per locus. The average number of alleles (N = 9.8), PIC value (0.658), observed heterozygosity (Ho = 0.71), and expected heterozygosity (He = 0.70) were higher in this study compared to values reported so far. Four ancestral populations were detected using STRUCTURE software and confirmed by Principal Coordinate Analysis (PCoA), and two of them (K1 and K4) could be attributed to the geographical origin of the accessions. A N-J tree grouped the 220 sweet cherry accessions within three main clusters and six subgroups. Accessions belonging to the four STRUCTURE populations roughly clustered together. Clustering confirmed known genealogical data for several accessions. The large genetic diversity of the collection was demonstrated, in particular within the landrace pool, justifying the efforts made over decades for their conservation. New sources of diversity will allow producers to face challenges, such as climate change and the need to develop more sustainable production system< Réduire
Mots clés
Fruit à noyau
Arbre fruitier à noyau
Mots clés en anglais
Prunus avium L
SSR
genetic diversity
population structure
genetic resources
breeding
Projet Européen
EU.CHERRY project
Origine
Importé de halUnités de recherche