BEILSMITH, Kathleen; THOEN, Manus P.M.; BRACHI, Benjamin; GLOSS, Andrew D.; KHAN, Mohammad H.; BERGELSON, Joy

doi:10.1111/tpj.14170

Métadonnées

Afficher la notice complète

Licence d’utilisation du document

BEILSMITH, Kathleen
Department of Ecology and Evolution [Chicago]

THOEN, Manus P.M.
Department of Ecology and Evolution [Chicago]

BRACHI, Benjamin
Biodiversité, Gènes & Communautés [BioGeCo]

Langue

Article de revue

Ce document a été publié dans

The Plant Journal. 2019, vol. 97, n° 1, p. 164-181

Wiley

Résumé en anglais

Environmental sequencing shows that plants harbor complex communities of microbes that vary across environments. However, many approaches for mapping plant genetic variation to microbe‐related traits were developed in the relatively simple context of binary host–microbe interactions under controlled conditions. Recent advances in sequencing and statistics make genome‐wide association studies (GWAS) an increasingly promising approach for identifying the plant genetic variation associated with microbes in a community context. This review discusses early efforts on GWAS of the plant phyllosphere microbiome and the outlook for future studies based on human microbiome GWAS. A workflow for GWAS of the phyllosphere microbiome is then presented, with particular attention to how perspectives on the mechanisms, evolution and environmental dependence of plant–microbe interactions will influence the choice of traits to be mapped.< Réduire

Métadonnées

Licence d’utilisation du document

Genome-wide association studies on the phyllosphere microbiome: Embracing complexity in host-microbe interactions

Langue

Ce document a été publié dans

Résumé en anglais

DOI

Origine

Unités de recherche