ENDELMAN, Jeffrey B.; PLOMION, Christophe

doi:10.1093/bioinformatics/btu091

Métadonnées

Afficher la notice complète

Licence d’utilisation du document

ENDELMAN, Jeffrey B.
University of Wisconsin-Madison

PLOMION, Christophe
Biodiversité, Gènes & Communautés [BioGeCo]

Langue

Article de revue

Ce document a été publié dans

Bioinformatics. 2014, vol. 30, n° 11, p. 1623-1624

Oxford University Press (OUP)

Résumé en anglais

Consensus genetic maps constructed from multiple populations are an important resource for both basic and applied research, including genome-wide association analysis, genome sequence assembly, and studies of evolution. The LPmerge software uses linear programming (LP) to efficiently minimize the mean absolute error between the consensus map and the linkage maps from each population. This minimization is performed subject to linear inequality constraints that ensure the ordering of the markers in the linkage maps is preserved. When marker order is inconsistent between linkage maps, a minimum set of ordinal constraints is deleted to resolve the conflicts.< Réduire

Métadonnées

Partager cette publication !

Licence d’utilisation du document

LPmerge: an R package for merging genetic maps by linear programming

Langue

Ce document a été publié dans

Résumé en anglais

URI

DOI

Origine

Unités de recherche