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First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study

dc.rights.licenseopenen_US
dc.contributor.authorIACOBUCCI, Claudio
dc.contributor.authorPIOTROWSKI, Christine
dc.contributor.authorAEBERSOLD, Ruedi
dc.contributor.authorAMARAL, Bruno C.
dc.contributor.authorANDREWS, Philip
dc.contributor.authorBERNFUR, Katja
dc.contributor.authorBORCHERS, Christoph
dc.contributor.authorBRODIE, Nicolas I.
dc.contributor.authorBRUCE, James E.
dc.contributor.authorCAO, Yong
dc.contributor.authorCHAIGNEPAIN, Stephane
dc.contributor.authorCHAVEZ, Juan D.
dc.contributor.authorCLAVEROL, Stéphane
dc.contributor.authorCOX, Jürgen
dc.contributor.authorDAVIS, Trisha
dc.contributor.authorDEGLIESPOSTI, Gianluca
dc.contributor.authorDONG, Meng-Qiu
dc.contributor.authorEDINGER, Nufar
dc.contributor.authorEMANUELSSON, Cecilia
dc.contributor.authorGAY, Marina
dc.contributor.authorGÖTZE, Michael
dc.contributor.authorGOMES-NETO, Francisco
dc.contributor.authorGOZZO, Fabio C.
dc.contributor.authorGUTIERREZ, Craig
dc.contributor.authorHAUPT, Caroline
dc.contributor.authorHECK, Albert J. R.
dc.contributor.authorHERZOG, Franz
dc.contributor.authorHUANG, Lan
dc.contributor.authorHOOPMANN, Michael R.
dc.contributor.authorKALISMAN, Nir
dc.contributor.authorKLYKOV, Oleg
dc.contributor.authorKUKAČKA, Zdeněk
dc.contributor.authorLIU, Fan
dc.contributor.authorMACCOSS, Michael J.
dc.contributor.authorMECHTLER, Karl
dc.contributor.authorMESIKA, Ravit
dc.contributor.authorMORITZ, Robert L.
dc.contributor.authorNAGARAJ, Nagarjuna
dc.contributor.authorNESATI, Victor
dc.contributor.authorNEVES-FERREIRA, Ana G. C.
dc.contributor.authorNINNIS, Robert
dc.contributor.authorNOVÁK, Petr
dc.contributor.authorO’REILLY, Francis J.
dc.contributor.authorPELZING, Matthias
dc.contributor.authorPETROTCHENKO, Evgeniy
dc.contributor.authorPIERSIMONI, Lolita
dc.contributor.authorPLASENCIA, Manolo
dc.contributor.authorPUKALA, Tara
dc.contributor.authorRAND, Kasper D.
dc.contributor.authorRAPPSILBER, Juri
dc.contributor.authorREICHMANN, Dana
dc.contributor.authorSAILER, Carolin
dc.contributor.authorSARNOWSKI, Chris P.
dc.contributor.authorSCHELTEMA, Richard A.
dc.contributor.authorSCHMIDT, Carla
dc.contributor.authorSCHRIEMER, David C.
dc.contributor.authorSHI, Yi
dc.contributor.authorSKEHEL, J. Mark
dc.contributor.authorSLAVIN, Moriya
dc.contributor.authorSOBOTT, Frank
dc.contributor.authorSOLIS-MEZARINO, Victor
dc.contributor.authorSTEPHANOWITZ, Heike
dc.contributor.authorSTENGEL, Florian
dc.contributor.authorSTIEGER, Christian E.
dc.contributor.authorTRABJERG, Esben
dc.contributor.authorTRNKA, Michael
dc.contributor.authorVILASECA, Marta
dc.contributor.authorVINER, Rosa
dc.contributor.authorXIANG, Yufei
dc.contributor.authorYILMAZ, Sule
dc.contributor.authorZELTER, Alex
dc.contributor.authorZIEMIANOWICZ, Daniel
dc.contributor.authorLEITNER, Alexander
dc.contributor.authorSINZ, Andrea
dc.date.accessioned2019
dc.date.available2019
dc.date.issued2019
dc.identifier.issn0003-2700en_US
dc.identifier.urihttps://oskar-bordeaux.fr/handle/20.500.12278/3836
dc.description.abstractEnThe number of publications in the field of chemical cross-linking combined with mass spectrometry (XL-MS) to derive constraints for protein three-dimensional structure modeling and to probe protein–protein interactions has increased during the last years. As the technique is now becoming routine for in vitro and in vivo applications in proteomics and structural biology there is a pressing need to define protocols as well as data analysis and reporting formats. Such consensus formats should become accepted in the field and be shown to lead to reproducible results. This first, community-based harmonization study on XL-MS is based on the results of 32 groups participating worldwide. The aim of this paper is to summarize the status quo of XL-MS and to compare and evaluate existing cross-linking strategies. Our study therefore builds the framework for establishing best practice guidelines to conduct cross-linking experiments, perform data analysis, and define reporting formats with the ultimate goal of assisting scientists to generate accurate and reproducible XL-MS results.
dc.language.isoENen_US
dc.subject.enPeptides and proteins
dc.subject.enMonomers
dc.subject.enProteomics
dc.subject.enNucleic acid structure Software
dc.title.enFirst Community-Wide, Comparative Cross-Linking Mass Spectrometry Study
dc.title.alternativeAnal. Chem.en_US
dc.typeArticle de revueen_US
dc.identifier.doi10.1021/acs.analchem.9b00658en_US
dc.subject.halChimie/Matériauxen_US
bordeaux.journalAnalytical Chemistryen_US
bordeaux.page6953-6961en_US
bordeaux.volume91en_US
bordeaux.hal.laboratoriesInstitut de Chimie & de Biologie des Membranes & des Nano-objets (CBMN) - UMR 5248
bordeaux.issue11en_US
bordeaux.institutionBordeaux INPen_US
bordeaux.institutionUniversité de Bordeauxen_US
bordeaux.peerReviewedouien_US
bordeaux.inpressnonen_US
hal.identifierhal-02510451
hal.version1
hal.date.transferred2020-03-17T17:15:17Z
hal.exporttrue
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