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Metabolite quantification data based on 1H-NMR profiling of eggplant or pepper fruit during its development

hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorROCH, Léa
hal.structure.identifierUnité de recherche sur les Biopolymères, Interactions Assemblages [BIA]
hal.structure.identifierBIBS - Plateforme Bioressources : Imagerie, Biochimie & Structure
hal.structure.identifierMetaboHUB-Bordeaux
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorDEBORDE, Catherine
hal.structure.identifierBiologie du fruit et pathologie [BFP]
hal.structure.identifierMetaboHUB-Bordeaux
hal.structure.identifierPlateforme Bordeaux Metabolome
hal.structure.identifierUnité de recherche sur les Biopolymères, Interactions Assemblages [BIA]
hal.structure.identifierBIBS - Plateforme Bioressources : Imagerie, Biochimie & Structure
dc.contributor.authorJACOB, Daniel
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCLAVÉ, Anaïs
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorBATSALE, Marguerite
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorGIBON, Yves
hal.structure.identifierBiologie du fruit et pathologie [BFP]
hal.structure.identifierMetaboHUB-Bordeaux
dc.contributor.authorMOING, Annick
dc.date.issued2024-11-13
dc.identifier.issn1756-0500
dc.description.abstractEnObjectives The primary metabolite contents of ripe fruits result from complex regulations during their development.For Solanaceae, these regulations have been widely studied in tomato. The fruit metabolite contents of other fruit species, such as pepper (Capsicum annuum L.) and eggplant (Solanum melongena L.), constitute a valuable resource for the community to study the regulation of fruit metabolism and identify common or species-dependent regulations. This dataset about major polar metabolites is part of a larger project that integrates other omics data for pepper and eggplant, and other fruit species for metabolomics and other omics.Data description We provide quantitative metabolite data of pepper and eggplant fruit along development. We sampled pepper and eggplant fruit cultivated in a tunnel or a greenhouse at 10 or 11 stages from anthesis to ripe fruit. We used proton nuclear magnetic resonance (1H-NMR) metabolomic profling of polar extracts to quantify the major metabolites and expressed the data in µmol per g fresh weight. Twenty-four metabolites were determined in pepper and 27 in eggplant. Nineteen common metabolites were quantifed in both fruit species including three soluble sugars and one sugar-alcohol, fve organic acids and nine free amino acids. These data can be combined with similar quantitative data on other species or complemented with other omics data to perform cross-species or cross-omics comparisons.
dc.description.sponsorshipModélisation intégrative du fruit pour un système de sélection unifié - ANR-15-CE20-0009
dc.description.sponsorshipDéveloppement d'une infrastructure française distribuée pour la métabolomique dédiée à l'innovation - ANR-11-INBS-0010
dc.language.isoen
dc.publisherBioMed Central
dc.subject.enPepper Capsicum annuum L
dc.subject.enEggplant
dc.subject.enFruit
dc.subject.enMetabolites
dc.subject.enBiochemical composition
dc.subject.enNMR
dc.subject.enMetabolomics
dc.subject.enDevelopmental stages
dc.title.enMetabolite quantification data based on 1H-NMR profiling of eggplant or pepper fruit during its development
dc.typeArticle de revue
dc.identifier.doi10.1186/s13104-024-06996-1
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale
dc.subject.halChimie/Chimie analytique
bordeaux.journalBMC Research Notes
bordeaux.page337
bordeaux.volume17
bordeaux.issue1
bordeaux.peerReviewedoui
hal.identifierhal-04800078
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-04800078v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=BMC%20Research%20Notes&rft.date=2024-11-13&rft.volume=17&rft.issue=1&rft.spage=337&rft.epage=337&rft.eissn=1756-0500&rft.issn=1756-0500&rft.au=ROCH,%20L%C3%A9a&DEBORDE,%20Catherine&JACOB,%20Daniel&CLAV%C3%89,%20Ana%C3%AFs&BATSALE,%20Marguerite&rft.genre=article


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