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High-performance comparative annotation

hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
hal.structure.identifierModels and Algorithms for the Genome [ MAGNOME]
dc.contributor.authorSHERMAN, David James
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
hal.structure.identifierModels and Algorithms for the Genome [ MAGNOME]
dc.contributor.authorLOIRA, Nicolás
hal.structure.identifierLaboratoire Bordelais de Recherche en Informatique [LaBRI]
hal.structure.identifierModels and Algorithms for the Genome [ MAGNOME]
dc.contributor.authorGOLENETSKAYA, Natalia
dc.contributor.editorMakeev
dc.contributor.editorVsevolod and Kucherov
dc.contributor.editorGregory
dc.date.accessioned2024-04-15T09:47:52Z
dc.date.available2024-04-15T09:47:52Z
dc.date.issued2010-06-15
dc.date.conference2010-06-15
dc.identifier.urihttps://oskar-bordeaux.fr/handle/20.500.12278/198133
dc.description.abstractEnRecent advances in sequencing technology have given rise to a new strategy in genome sequencing: whereas previously it was only possible to sequence and laboriously annotate one genome at a time, we now routinely sequence and compare groups of 5-10 phylogenetically related species and strains at a time. Does it still make sense to assemble whole genomes? We argue yes, on the condition that automatic whole-genome annotation and comparison can be performed on a large scale. We the results that can be obtained with our Magus comparative genomics pipeline, and show how its itegrated, comparative view of related genomes can be exploited for comparative whole-genome metabolic modeling and for high-level data-mining.
dc.language.isoen
dc.title.enHigh-performance comparative annotation
dc.typeCommunication dans un congrès
dc.subject.halInformatique [cs]/Bio-informatique [q-bio.QM]
dc.subject.halSciences du Vivant [q-bio]/Bio-Informatique, Biologie Systémique [q-bio.QM]
bordeaux.hal.laboratoriesLaboratoire Bordelais de Recherche en Informatique (LaBRI) - UMR 5800*
bordeaux.institutionUniversité de Bordeaux
bordeaux.institutionBordeaux INP
bordeaux.institutionCNRS
bordeaux.conference.titleBioinformatics after next-generation sequencing
bordeaux.countryRU
bordeaux.conference.cityZvenigorod
bordeaux.peerReviewedoui
hal.identifierinria-00563533
hal.version1
hal.invitedoui
hal.proceedingsoui
hal.conference.organizerRussian Academy of Sciences
hal.conference.end2010-06-17
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//inria-00563533v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.date=2010-06-15&rft.au=SHERMAN,%20David%20James&LOIRA,%20Nicol%C3%A1s&GOLENETSKAYA,%20Natalia&rft.genre=unknown


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