Characterizing microbial interactions in controlled and natural microbial communities
hal.structure.identifier | Pleiade, from patterns to models in computational biodiversity and biotechnology [PLEIADE] | |
hal.structure.identifier | Science et Technologie du Lait et de l'Oeuf [STLO] | |
dc.contributor.author | LECOMTE, Maxime | |
hal.structure.identifier | Pleiade, from patterns to models in computational biodiversity and biotechnology [PLEIADE] | |
hal.structure.identifier | Biodiversité, Gènes & Communautés [BioGeCo] | |
dc.contributor.author | LABARTHE, Simon | |
hal.structure.identifier | Pleiade, from patterns to models in computational biodiversity and biotechnology [PLEIADE] | |
dc.contributor.author | SHERMAN, David James | |
hal.structure.identifier | Science et Technologie du Lait et de l'Oeuf [STLO] | |
dc.contributor.author | FALENTIN, Hélène | |
hal.structure.identifier | Pleiade, from patterns to models in computational biodiversity and biotechnology [PLEIADE] | |
dc.contributor.author | FRIOUX, Clémence | |
dc.date.conference | 2022-05-16 | |
dc.description.abstractEn | The massive development and use of multi omics data permits a better understanding of complex microbial ecosystems at the metabolic level. However, this data and their integration varies depending on the size and characteristics of the considered ecosystems. In this talk, I will discuss of two different approaches applied respectively to a controlled microbial community and natural communities in order to reveal putative bacterium-bacterium interactions. I will first describe how numerical optimisation of metabolic models constrained by genomics and metatranscriptomics data can accurately describe a cheese starter community. I will then detail a discrete method based on only genomic data aiming to characterize the competition and cooperation potentials in natural communities. | |
dc.language.iso | en | |
dc.title.en | Characterizing microbial interactions in controlled and natural microbial communities | |
dc.type | Communication dans un congrès | |
dc.subject.hal | Informatique [cs] | |
dc.subject.hal | Mathématiques [math] | |
dc.subject.hal | Sciences du Vivant [q-bio]/Alimentation et Nutrition | |
dc.subject.hal | Sciences du Vivant [q-bio]/Bio-Informatique, Biologie Systémique [q-bio.QM] | |
bordeaux.conference.title | Workshop SymBioDiversity | |
bordeaux.country | CL | |
bordeaux.conference.city | Santiago | |
bordeaux.peerReviewed | oui | |
hal.identifier | hal-03857848 | |
hal.version | 1 | |
hal.invited | non | |
hal.proceedings | non | |
hal.conference.end | 2022-05-17 | |
hal.popular | non | |
hal.audience | Internationale | |
hal.origin.link | https://hal.archives-ouvertes.fr//hal-03857848v1 | |
bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.au=LECOMTE,%20Maxime&LABARTHE,%20Simon&SHERMAN,%20David%20James&FALENTIN,%20H%C3%A9l%C3%A8ne&FRIOUX,%20Cl%C3%A9mence&rft.genre=unknown |
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