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Shifting the paradigm from pathogens to pathobiome: new concepts in the light of meta-omics

hal.structure.identifierBiologie moléculaire et immunologie parasitaires et fongiques [BIPAR]
dc.contributor.authorVAYSSIER TAUSSAT, Muriel
hal.structure.identifierContrôle des maladies animales exotiques et émergentes [UMR CMAEE]
hal.structure.identifierInteractions hôtes-agents pathogènes [Toulouse] [IHAP]
dc.contributor.authorALBINA, Emmanuel
hal.structure.identifierCentre de Biologie pour la Gestion des Populations [UMR CBGP]
dc.contributor.authorCITTI, Christine
hal.structure.identifierInstitut de Recherche en Horticulture et Semences [IRHS]
dc.contributor.authorCOSSON, Jean-Franҫois
hal.structure.identifierBIOlogie et GEstion des Risques en agriculture [BIOGER]
dc.contributor.authorJACQUES, Marie-Agnès
hal.structure.identifierScience et Technologie du Lait et de l'Oeuf [STLO]
dc.contributor.authorLEBRUN, Marc-Henri
hal.structure.identifierScience et Technologie du Lait et de l'Oeuf [STLO]
hal.structure.identifierDiversité, Génomes & Interactions Microorganismes - Insectes [Montpellier] [DGIMI]
dc.contributor.authorLE LOIR, Yves
hal.structure.identifierMICrobiologie de l'ALImentation au Service de la Santé [MICALIS]
dc.contributor.authorOGLIASTRO, Mylène
hal.structure.identifierBiologie et Génétique des Interactions Plante-Parasite [UMR BGPI]
dc.contributor.authorPETIT, Marie-Agnès
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorROUMAGNAC, Philippe
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
dc.date.issued2014
dc.identifier.issn2235-2988
dc.description.abstractEnThe concept of pathogenesis has evolved considerably over recent years, and the scenario "a microbe + virulence factors = disease" is probably far from reality in a number of cases. Actual pathogens have extremely broad biological diversity and are found in all major groups of microorganisms (viruses, bacteria, fungi, protozoa…). Their pathogenicity results from strong and often highly specific interactions they have with either their microbial environment, hosts and/or arthropod vectors. In this review, we explore the contribution of metagenomic approaches toward understanding pathogens within the context of microbial communities. With this broader view, we discussed the concept of "pathobiome" and the research questions that this raises.
dc.language.isoen
dc.publisherFrontiers
dc.rights.urihttp://hal.archives-ouvertes.fr/licences/copyright/
dc.subject.ennew generation sequencing
dc.subject.enmicrobial ecosystem
dc.subject.eninteractions
dc.title.enShifting the paradigm from pathogens to pathobiome: new concepts in the light of meta-omics
dc.typeArticle de revue
dc.typeArticle de synthèse
dc.identifier.doi10.3389/fcimb.2014.00029
dc.subject.halSciences du Vivant [q-bio]
bordeaux.journalFrontiers in Cellular and Infection Microbiology
bordeaux.pagen/a
bordeaux.volume4
bordeaux.peerReviewedoui
hal.identifierhal-01153583
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-01153583v1
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