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Complete genome sequence of cherry virus T, a novel cherry-infecting tepovirus

hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorMARAIS, Armelle
hal.structure.identifierPalacky University Olomouc
dc.contributor.authorŠAFÁŘOVÁ, D.
hal.structure.identifierPalacky University Olomouc
dc.contributor.authorNAVRÁTIL, M.
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorFAURE, Chantal
hal.structure.identifierCtifl - Centre de Lanxade [Ctifl - Centre de Lanxade ]
dc.contributor.authorCORNAGGIA, D.
hal.structure.identifierCtifl - Centre de Lanxade [Ctifl - Centre de Lanxade ]
dc.contributor.authorBRANS, Y.
hal.structure.identifierResearch and Breeding Institute of Pomology Holovousy [VSUO]
dc.contributor.authorSUCHÁ, J.
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
dc.date.issued2020
dc.identifier.issn0304-8608
dc.description.abstractEnDouble-stranded RNA and total RNA purified from sour cherry leaves (Prunus cerasus, cv. Amarelka Chvalkovicka) was analyzed by high-throughput sequencing. BLAST annotation identified contigs with homology to several already known cherry-infecting viruses (prune dwarf virus, prunus necrotic ringspot virus, prunus virus F, little cherry virus 1) as well as contigs with sequences more distantly related to those of members of the family Betaflexiviridae and in particular to prunus virus T of the genus Tepovirus. The full genome sequence of a putative virus (6,847 nucleotides [nt]; GenBank no. MT090966) was assembled and completed at the genome ends. The genome has a typical tepovirus organization, containing three overlapping open reading frames (ORFs), encoding a replication-associated protein, a movement protein and a capsid protein, respectively. Both its genome organization and its phylogenetic relationships show that the virus belongs to the genus Tepovirus, but considering the species demarcation criteria for the family Betaflexiviridae, it appears to represent a novel virus species, and we propose the name "cherry virus T" (ChVT) for this virus.
dc.language.isoen
dc.publisherSpringer Verlag
dc.subjectArbre fruitier à noyau
dc.subjectCerisier
dc.subjectVirus phytopathogène
dc.subjectprunus cerasus
dc.subjectprunus virus T
dc.subjectVirologie végétale
dc.subjectTepovirus
dc.subjectGénome
dc.subjectSéquence génomique
dc.subjectPathologie végétale
dc.subjectSanté des plantes
dc.title.enComplete genome sequence of cherry virus T, a novel cherry-infecting tepovirus
dc.typeArticle de revue
dc.identifier.doi10.1007/s00705-020-04656-w
dc.subject.halSciences du Vivant [q-bio]
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie
bordeaux.journalArchives of Virology
bordeaux.page1711-1714
bordeaux.volume165
bordeaux.peerReviewedoui
hal.identifierhal-02612488
hal.version1
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02612488v1
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