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hal.structure.identifierUniversité Sciences et Technologies - Bordeaux 1 [UB]
dc.contributor.authorBEURTON-AYMAR, Marie
hal.structure.identifierUniversité Sciences et Technologies - Bordeaux 1 [UB]
dc.contributor.authorNGUYEN, Tung Vu-Ngoc
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCOLOMBIE, Sophie
dc.date.issued2014
dc.identifier.isbn978-1-62703-687-0
dc.description.abstractEnThis chapter focuses on the way to build a metabolic network and how to analyze its structure. The first part of this chapter describes the methods of the network model reconstruction from biochemical data found in specialized databases and/or literature. The second part deals with metabolic pathway analysis as a useful tool for better understanding the complex architecture of intracellular metabolism. The graph analysis and the stoichiometric network analysis are important approaches for understanding the network topology and consequently the function of metabolic networks. Among the methods presented, the Elementary Flux Modes analysis will be more detailed. Finally, we illustrate in this chapter an example of network reconstruction from heterotrophic plant cells metabolism and its topological analysis leading to a huge number of Elementary Flux Modes.
dc.language.isoen
dc.publisherSpringer Science+Business Media
dc.publisher.locationNew York (united states)
dc.source.titlePlant Metabolic Flux Analysis : Methods and Protocols
dc.subjectplant cell metabolism
dc.subject.enmetabolic network
dc.subject.enmetabolic pathway analysis
dc.subject.enstoichiometry matrix
dc.subject.entopological analysis
dc.subject.enelementary flux modes
dc.title.enMetabolic network reconstruction and their topological analysis
dc.typeChapitre d'ouvrage
dc.identifier.doi10.1007/978-1-62703-688-7_2
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale
bordeaux.volume1090
bordeaux.title.proceedingPlant Metabolic Flux Analysis : Methods and Protocols
hal.identifierhal-02796948
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02796948v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.btitle=Plant%20Metabolic%20Flux%20Analysis%20:%20Methods%20and%20Protocols&rft.date=2014&rft.volume=1090&rft.au=BEURTON-AYMAR,%20Marie&NGUYEN,%20Tung%20Vu-Ngoc&COLOMBIE,%20Sophie&rft.isbn=978-1-62703-687-0&rft.genre=unknown


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