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New tools and workflows on W4M, the Galaxy metabolomic infrastructure

hal.structure.identifierUnité de Nutrition Humaine [UNH]
dc.contributor.authorLANDI, Marion
hal.structure.identifierUnité de Nutrition Humaine [UNH]
dc.contributor.authorLOPEZ, Claire
hal.structure.identifierMetaToul AXIOM [E20]
dc.contributor.authorTREMBLAY-FRANCO, Marie
hal.structure.identifierMetaToul AXIOM [E20]
dc.contributor.authorCANLET, Cécile
hal.structure.identifierInstitut de Recherche en Informatique et Systèmes Aléatoires [IRISA]
dc.contributor.authorGUITTON, Yann
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorJACOB, Daniel
hal.structure.identifierABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science [ABIMS]
dc.contributor.authorLE CORGUILLÉ, Gildas
hal.structure.identifierMetaToul AXIOM [E20]
dc.contributor.authorMARTIN, Jean-Francois
hal.structure.identifierABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science [ABIMS]
dc.contributor.authorMONSOOR, Misharl
hal.structure.identifierUnité de Nutrition Humaine [UNH]
dc.contributor.authorPAULHE, Nils
hal.structure.identifierUnité de Nutrition Humaine [UNH]
dc.contributor.authorPÉTÉRA, Mélanie
hal.structure.identifierABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science [ABIMS]
dc.contributor.authorVACQUIE, Camille
hal.structure.identifierUnité de Nutrition Humaine [UNH]
dc.contributor.authorGIACOMONI, Franck
hal.structure.identifierUnité de Nutrition Humaine [UNH]
dc.contributor.authorPUJOS-GUILLOT, Estelle
hal.structure.identifierABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science [ABIMS]
dc.contributor.authorCARON, Christophe
hal.structure.identifierLaboratoire d'analyse des données et d'intelligence des systèmes (CEA, LIST) [LADIS (CEA, LIST)]
dc.contributor.authorTHÉVENOT, Etienne
dc.date.issued2015-06
dc.date.conference2015-06-09
dc.description.abstractEnNew and innovative modules dedicated to 1D NMR spectra processing have been developed and integrated in Galaxy. These tools are focused on NMR specific process, such as construction of a binned data from spectra (bucketing), several normalisation methods, and annotation. This work within Galaxy has opened the door to the possibility of creating workflows including all the data treatment steps in metabolomic for each analytical technique.
dc.language.isoen
dc.subject.enspectrum analysis
dc.subject.enstatistical analysis
dc.subject.ensignal processing
dc.subject.enartificial intelligence
dc.subject.enclassification
dc.subject.enannotation
dc.subject.enLC-MS
dc.subject.enmetabolomics
dc.subject.enworkflow
dc.subject.enliquid chromatography
dc.subject.enmass spectrometry
dc.title.enNew tools and workflows on W4M, the Galaxy metabolomic infrastructure
dc.typeAutre communication scientifique (congrès sans actes - poster - séminaire...)
dc.subject.halInformatique [cs]/Bio-informatique [q-bio.QM]
dc.subject.halSciences du Vivant [q-bio]/Biochimie, Biologie Moléculaire/Génomique, Transcriptomique et Protéomique [q-bio.GN]
bordeaux.conference.title9e Journées scientifiques du RFMF
bordeaux.countryFR
bordeaux.conference.cityLille
bordeaux.peerReviewednon
hal.identifierhal-02743697
hal.version1
hal.invitednon
hal.proceedingsnon
hal.conference.organizerRéseau Francophone de Métabolomique et Fluxomique (RFMF). FRA.
hal.conference.end2015-06-11
hal.popularnon
hal.audienceNationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02743697v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.date=2015-06&rft.au=LANDI,%20Marion&LOPEZ,%20Claire&TREMBLAY-FRANCO,%20Marie&CANLET,%20C%C3%A9cile&GUITTON,%20Yann&rft.genre=conference


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