Identification of two novel putative satellite RNAs with hammerhead structures in the virome of French and Spanish carrot samples
hal.structure.identifier | Universidad Politécnica de Madrid [UPM] | |
dc.contributor.author | BABALOLA, B | |
hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
dc.contributor.author | SCHÖNEGGER, Deborah | |
hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
dc.contributor.author | FAURE, Chantal | |
hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
dc.contributor.author | MARAIS, Armelle | |
hal.structure.identifier | Universidad Politécnica de Madrid [UPM] | |
dc.contributor.author | FRAILE, A. | |
hal.structure.identifier | Universidad Politécnica de Madrid [UPM] | |
dc.contributor.author | GARCIA-ARENAL, F. | |
hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
dc.contributor.author | CANDRESSE, Thierry | |
dc.date.issued | 2022 | |
dc.identifier.issn | 0304-8608 | |
dc.description.abstractEn | Carrot virome analysis using high-throughput sequencing revealed the presence of two RNA molecules with properties of satellite RNAs and homologous to the satellite RNA of cereal yellow dwarf virus-RPV (CYDV-RPV). Satellite 1 is 298 nt long, while Satellite 2 is 368 nt long. Their positive and negative genome strands contain hammerhead ribozymes similar to those found in other self-cleaving satellite RNAs. While both satellites were detected in Spanish carrot populations, only satellite 2 was found in French carrot populations. The most likely helper virus for these two satellites is carrot red leaf virus (CtRLV), which similar to CYDV-RPV is a Polerovirus. | |
dc.language.iso | en | |
dc.publisher | Springer Verlag | |
dc.subject.en | satellite | |
dc.subject.en | high-throughput sequencing | |
dc.subject.en | ribozyme | |
dc.subject.en | Polerovirus | |
dc.title.en | Identification of two novel putative satellite RNAs with hammerhead structures in the virome of French and Spanish carrot samples | |
dc.type | Article de revue | |
dc.identifier.doi | 10.1007/s00705-022-05538-z | |
dc.subject.hal | Sciences du Vivant [q-bio] | |
dc.subject.hal | Sciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie | |
dc.description.sponsorshipEurope | Horizon 2020 Marie Skłodowska-Curie Actions Innovative Training Network (H2020 MSCA-60 ITN) | |
bordeaux.journal | Archives of Virology | |
bordeaux.page | 2287-2292 | |
bordeaux.volume | 167 | |
bordeaux.issue | 11 | |
bordeaux.peerReviewed | oui | |
hal.identifier | hal-03749075 | |
hal.version | 1 | |
hal.popular | non | |
hal.audience | Internationale | |
hal.origin.link | https://hal.archives-ouvertes.fr//hal-03749075v1 | |
bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Archives%20of%20Virology&rft.date=2022&rft.volume=167&rft.issue=11&rft.spage=2287-2292&rft.epage=2287-2292&rft.eissn=0304-8608&rft.issn=0304-8608&rft.au=BABALOLA,%20B&SCH%C3%96NEGGER,%20Deborah&FAURE,%20Chantal&MARAIS,%20Armelle&FRAILE,%20A.&rft.genre=article |
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