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Four phenotypically and phylogenetically distinct lineages in Phytophthora lateralis

hal.structure.identifierForest Research, Alice Holt Lodge
dc.contributor.authorBRASIER, Clive M.
hal.structure.identifierForest Research, Alice Holt Lodge
dc.contributor.authorFRANCESCHINI, Selma
hal.structure.identifierUniversità degli studi della Tuscia [Viterbo]
dc.contributor.authorVETTRAINO, Anna Maria
hal.structure.identifierOregon State University [OSU]
dc.contributor.authorHANSEN, Everett M.
hal.structure.identifierForest Research, Northern Research Station
dc.contributor.authorGREEN, Sarah
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorROBIN, Cécile
hal.structure.identifierForest Research [Great Britain]
dc.contributor.authorWEBBER, Joan F.
hal.structure.identifierUniversità degli studi della Tuscia [Viterbo]
dc.contributor.authorVANNINI, Andrea
dc.date.accessioned2022-10-12T12:50:56Z
dc.date.available2022-10-12T12:50:56Z
dc.date.issued2012
dc.identifier.issn1878-6146
dc.identifier.urihttps://oskar-bordeaux.fr/handle/20.500.12278/157324
dc.description.abstractEnUntil recently Phytophthora lateralis was known only as the cause of dieback and mortality of Chamaecyparis lawsoniana in its native range in the Pacific Northwest (PNW). Since the 1990s however disease outbreaks have occurred increasingly on ornamental C. lawsoniana in Europe; and in 2007 the pathogen was discovered in soil around old growth Chamaecyparis obtusa in Taiwan, where it may be endemic. When the phenotypes of over 150 isolates of P. lateralis from Taiwan, across the PNW (British Columbia to California) and from France, the Netherlands and the UK were compared three growth rate groups were resolved: one slow growing from Taiwan, one fast growing from the PNW and Europe, and one of intermediate growth from a small area of the UK. Within these growth groups distinct subtypes were identified based on colony patterns and spore metrics and further discriminated in a multivariate analysis. The assumption that the three main growth groups represented phylogenetic units was tested by comparative sequencing of two mitochondrial and three nuclear genes. This assumption was confirmed. In addition two phenotype clusters within the Taiwan growth group were also shown to be phylogenetically distinct. These four phenotypically and genotypically unique populations are informally designated as the PNW lineage, the UK lineage, the Taiwan J lineage, and the Taiwan K lineage. Their characteristics and distribution are described and their evolution, taxonomic, and plant health significance is discussed.
dc.language.isoen
dc.publisherElsevier
dc.subjectevolution
dc.subject.encolony pattern
dc.subject.engrowth rate
dc.subject.enmultigene phylogeny
dc.subject.enmultivariate analysis
dc.title.enFour phenotypically and phylogenetically distinct lineages in Phytophthora lateralis
dc.typeArticle de revue
dc.identifier.doi10.1016/j.funbio.2012.10.002
dc.subject.halSciences du Vivant [q-bio]
bordeaux.journalFungal Biology
bordeaux.page1232-1249
bordeaux.volume116
bordeaux.hal.laboratoriesBioGeCo (Biodiversité Gènes & Communautés) - UMR 1202*
bordeaux.issue12
bordeaux.institutionUniversité de Bordeaux
bordeaux.institutionINRAE
bordeaux.peerReviewedoui
hal.identifierhal-02652282
hal.version1
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02652282v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Fungal%20Biology&rft.date=2012&rft.volume=116&rft.issue=12&rft.spage=1232-1249&rft.epage=1232-1249&rft.eissn=1878-6146&rft.issn=1878-6146&rft.au=BRASIER,%20Clive%20M.&FRANCESCHINI,%20Selma&VETTRAINO,%20Anna%20Maria&HANSEN,%20Everett%20M.&GREEN,%20Sarah&rft.genre=article


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