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hal.structure.identifierBiodiversité, Gènes et Ecosystèmes [BioGeCo]
dc.contributor.authorPETIT, Remy
hal.structure.identifierBiodiversité, Gènes et Ecosystèmes [BioGeCo]
hal.structure.identifierUniversité Sciences et Technologies - Bordeaux 1 [UB]
dc.contributor.authorDEGUILLOUX, Marie-France
hal.structure.identifierEcologie Comportementale et Biologie des Populations de Poissons [ECOBIOP]
dc.contributor.authorCHAT, Joëlle
hal.structure.identifierBiodiversité, Gènes et Ecosystèmes [BioGeCo]
hal.structure.identifierDepartment of OBEE
dc.contributor.authorGRIVET, Delphine
hal.structure.identifierBiodiversité, Gènes et Ecosystèmes [BioGeCo]
dc.contributor.authorGARNIER‐GÉRÉ, Pauline
hal.structure.identifierPlant Genetics Institute
dc.contributor.authorVENDRAMIN, Giovanni G.
dc.date.issued2005
dc.identifier.issn0962-1083
dc.description.abstractEnMutation rates at microsatellites tend to increase with the number of repeats of the motif, leading to higher levels of polymorphism at long microsatellites. To standardize levels of diversity when microsatellites differ in size, we investigate the relationship between tract length and variation and provide a formula to adjust allelic richness to a fixed mean number of repeats in the specific case of chloroplast microsatellites. A comparison between 39 loci from eight species of conifers (where chloroplast DNA is paternally inherited) and 64 loci from 12 species of angiosperms (where chloroplast DNA is generally predominantly maternally inherited) indicates that the greater allelic richness found in conifers remains significant after controlling for number of repeats. The approach stresses the advantage of reporting variation in number of repeats instead of relative fragment sizes
dc.language.isoen
dc.publisherWiley
dc.subjectASCERTAINMENT BIAS
dc.subjectADN CHLOROPLASTIQUE
dc.subject.enALLELIC RICHNESS
dc.subject.enGENETIC DIVERSITY
dc.subject.enRAREFACTION
dc.subject.enSLIPPAGE
dc.subject.enSTANDARDIZATION
dc.title.enStandardizing for microsatellite length in comparisons of genetic diversity
dc.typeArticle de revue
dc.identifier.doi10.1111/j.1365-294X.2005.02446.x
dc.subject.halSciences du Vivant [q-bio]/Biochimie, Biologie Moléculaire
bordeaux.journalMolecular Ecology
bordeaux.page885-890
bordeaux.volume14
bordeaux.issue3
bordeaux.peerReviewedoui
hal.identifierhal-02682716
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02682716v1
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