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Transcriptomics analysis of ‘Cabernet Sauvignon’ berry skins from Reno and Bordeaux in the late stages of ripening

dc.rights.licenseopenen_US
dc.contributor.authorCRAMER, Grant R.
hal.structure.identifierEcophysiologie et Génomique Fonctionnelle de la Vigne [UMR EGFV]
dc.contributor.authorCOCHETEL, Noe
dc.contributor.authorGHAN, Ryan
hal.structure.identifierEcophysiologie et Génomique Fonctionnelle de la Vigne [UMR EGFV]
dc.contributor.authorDESTRAC, Agnès
IDREF: 228222338
hal.structure.identifierEcophysiologie et Génomique Fonctionnelle de la Vigne [UMR EGFV]
dc.contributor.authorDELROT, Serge
IDREF: 058711503
dc.date.accessioned2020-10-22T14:35:28Z
dc.date.available2020-10-22T14:35:28Z
dc.date.issued2019-08-01
dc.date.conference2018-07-15
dc.identifier.issn0567-7572en_US
dc.identifier.urioai:crossref.org:10.17660/actahortic.2019.1248.51
dc.identifier.urihttps://oskar-bordeaux.fr/handle/20.500.12278/11463
dc.description.abstractEnTranscript abundances in the skins of 'Cabernet Sauvignon' grapes grown in Bordeaux (BOD), France, were compared with those grown in Reno (RNO), Nevada, USA, during the late stages of berry development at similar berry sugar levels (19‑26 °Brix). Day lengths were similar in the two locations, but day temperatures were higher and night temperatures lower in RNO. Sugar levels were estimated by measuring total soluble solids (TSS). TSS was lower in berries harvested in BOD compared with RNO at maturity levels considered optimum for harvest in their local locations. RNA-seq analysis revealed that there were 4455 differentially expressed genes (DEGs) between BOD and RNO grape skins at approximately 22 °Brix. The top gene ontology (GO) categories of the DEGs were involved in response to stimulus, response to stress, and transport. DEGs included autophagy, terpene synthase and pathogen-response genes. Transcript abundance profiles in the berry skins at maturity were highly dynamic and sensitive to the environment in both BOD and RNO. Many DEGs could be associated with different environmental conditions that affected the berries in the two locations.
dc.language.isoENen_US
dc.publisherInternational Society for Horticultural Science (ISHS)en_US
dc.sourcecrossref
dc.title.enTranscriptomics analysis of ‘Cabernet Sauvignon’ berry skins from Reno and Bordeaux in the late stages of ripening
dc.typeCommunication dans un congrès avec actesen_US
dc.identifier.doi10.17660/actahortic.2019.1248.51en_US
dc.subject.halSciences du Vivant [q-bio]/Biologie végétaleen_US
bordeaux.page353-360en_US
bordeaux.hal.laboratoriesEcophysiologie et Génomique Fonctionnelle de la Vigne (EGFV) - UMR 1287en_US
bordeaux.issue1248en_US
bordeaux.institutionBordeaux Sciences Agroen_US
bordeaux.institutionUniversité de Bordeauxen_US
bordeaux.conference.titleXII International Conference on Grapevine Breeding and Geneticsen_US
bordeaux.countryfren_US
bordeaux.title.proceedingActa Horticulturaeen_US
bordeaux.conference.cityBordeauxen_US
bordeaux.peerReviewedouien_US
bordeaux.import.sourcedissemin
hal.identifierhal-02975435
hal.version1
hal.date.transferred2020-10-22T14:35:32Z
hal.exporttrue
workflow.import.sourcedissemin
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