Mostrar el registro sencillo del ítem

Mining belowground and aboveground microbiome data to identify microbial biomarkers of grapevine health and yield

hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
hal.structure.identifierPleiade, from patterns to models in computational biodiversity and biotechnology [PLEIADE]
dc.contributor.authorFOURNIER, Paola
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
hal.structure.identifierEcophysiologie et Génomique Fonctionnelle de la Vigne [UMR EGFV]
hal.structure.identifierCentre de recherche Robert-Jean e Vogüé Moët-Hennessy, Oiry
dc.contributor.authorPELLAN, Lucile
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
hal.structure.identifierEcole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine [Bordeaux Sciences Agro]
hal.structure.identifierUniversité de Bordeaux [UB]
hal.structure.identifierInstitut des Sciences de la Vigne et du Vin [Villenave d'Ornon] [ISVV]
dc.contributor.authorJASWA, Aarti
hal.structure.identifierDepartment of Biological Engineering, Utah State University, Utah, U.S.A.
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
dc.contributor.authorMARTIN, Valérie
hal.structure.identifierSchool of Biosciences
hal.structure.identifierBirmingham Institute of Forest Research [BIFoR]
hal.structure.identifierInstitute of Microbiology and Infection
hal.structure.identifierUniversity of Birmingham [Birmingham]
dc.contributor.authorCAMBON, Marine
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
dc.contributor.authorCHARGY, Manon
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
dc.contributor.authorDUFOUR, Marie-Cecile
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
hal.structure.identifierEcole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine [Bordeaux Sciences Agro]
dc.contributor.authorVALLANCE, Jessica
hal.structure.identifierUniversité de Bordeaux [UB]
hal.structure.identifierEcole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine [Bordeaux Sciences Agro]
hal.structure.identifierUnité de Recherche Œnologie [Villenave d'Ornon] [OENO]
hal.structure.identifierInstitut des Sciences de la Vigne et du Vin [Villenave d'Ornon] [ISVV]
dc.contributor.authorMARTINS, Guilherme
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorCHANCEREL, Emilie
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorBONNARD, Olivier
hal.structure.identifierSanté des Écosystèmes Viticoles Économes en intraNts [UMT SEVEN]
dc.contributor.authorRAYNAL, Marc
hal.structure.identifierSanté des Écosystèmes Viticoles Économes en intraNts [UMT SEVEN]
dc.contributor.authorDEBORD, Christian
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
hal.structure.identifierVigne et Vin [UE VIGNE BORDEAUX]
dc.contributor.authorDELIERE, Laurent
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
dc.contributor.authorDELMOTTE, François
hal.structure.identifierCentre de recherche Robert-Jean e Vogüé Moët-Hennessy, Oiry
dc.contributor.authorBRÉVOT, Marc
hal.structure.identifierCentre de recherche Robert-Jean e Vogüé Moët-Hennessy, Oiry
dc.contributor.authorMERCIER, Laurence
hal.structure.identifierPleiade, from patterns to models in computational biodiversity and biotechnology [PLEIADE]
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorLABARTHE, Simon
hal.structure.identifierUniversité de Montpellier [UM]
hal.structure.identifierInstitut Agro Montpellier
hal.structure.identifierDiversité, Adaptation et Amélioration de la Vigne [AGAP] [DAAV]
dc.contributor.authorTHIS, Patrice
hal.structure.identifierSanté et agroécologie du vignoble [UMR SAVE]
dc.contributor.authorVACHER, Corinne
dc.date.conference2025-07-27
dc.description.abstractEnVineyards are home to a wide diversity of microorganisms that interact with plants and with each other. Some microorganisms are grapevine pathogens, such as the oomycete Plasmopara viticola, which causes grapevine downy mildew (DM). Others have positive effects on vine health through protection against pathogens, resistance to abiotic stress and improved nutrition. These beneficial plant-microbe and microbe-microbe interactions, as well as the conservation of microbial diversity, have gained more attention in recent years because they could represent an alternative to the use of fungicides and fertilizer in viticulture and improve vineyard resilience to multiple stresses including those caused by climate change. In this study, we aimed to (i) identify microbial candidates for the biocontrol of DM and (ii) identify microbial biomarkers of high and stable yields over time. We analyzed the microbiota (i) in leaves and topsoil in seven pairs of vineyard plots with contrasting susceptibility to DM according to long-term epidemiological records collected in the Bordeaux region and (ii) in roots and soil in ten pairs of vineyard plots with contrasting yields according to a long-term yield database collected in the Champagne region. We combined differential abundance analyses, Random Forest algorithm, and Threshold Indicator Taxa Analysis (TITAN), and we identified fungal and bacterial taxa that were significantly more abundant in plots with low susceptibility to DM and in plots with high and stable yields. Our results revealed that several species of basidiomycete yeasts were significantly more abundant in the grapevine phyllosphere of plots with low susceptibility to DM, while taxa belonging to arbuscular mycorrhizal fungi were significantly more abundant in plots with high and stable yields. These results suggest that both the aboveground and belowground microbiomes play a role in the performance of grapevine. The relationships between grapevine performance and the abundance of specific microbial taxa should however be analyzed in controlled experiments to demonstrate the role played by microorganisms. I will present results of in vitro confrontation tests between basidiomycete yeasts and P. viticola to show that mining microbiome data can guide the search for microbial taxa beneficial to grapevine.
dc.language.isoen
dc.subject.enarbuscular mycorrhizal fungi
dc.subject.enphyllosphere
dc.subject.enroot
dc.subject.endisease management
dc.subject.ensustainable viticulture
dc.subject.engrape-associated microorganisms
dc.title.enMining belowground and aboveground microbiome data to identify microbial biomarkers of grapevine health and yield
dc.typeCommunication dans un congrès
dc.subject.halSciences de l'environnement/Biodiversité et Ecologie
bordeaux.conference.title23. GiESCO 2025 - 23. Group of International Experts of vitivinicultural Systems for CoOperation
bordeaux.countryDE
bordeaux.conference.cityGeisenheim
bordeaux.peerReviewedoui
hal.identifierhal-05303323
hal.version1
hal.invitednon
hal.proceedingsnon
hal.conference.end2025-07-31
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-05303323v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.au=FOURNIER,%20Paola&PELLAN,%20Lucile&JASWA,%20Aarti&MARTIN,%20Val%C3%A9rie&CAMBON,%20Marine&rft.genre=unknown


Archivos en el ítem

ArchivosTamañoFormatoVer

No hay archivos asociados a este ítem.

Este ítem aparece en la(s) siguiente(s) colección(ones)

Mostrar el registro sencillo del ítem