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Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA

hal.structure.identifierUniversity of Jyväskylä [JYU]
hal.structure.identifierResearch Centre for Ecological Change
dc.contributor.authorOVASKAINEN, Otso
hal.structure.identifierUniversity of Jyväskylä [JYU]
dc.contributor.authorABREGO, Nerea
hal.structure.identifierUniversity of Jyväskylä [JYU]
dc.contributor.authorFURNEAUX, Brendan
hal.structure.identifierHelsingin yliopisto = Helsingfors universitet = University of Helsinki
dc.contributor.authorHARDWICK, Bess
hal.structure.identifierOrganismal and Evolutionary Biological Research Programme [OEB]
dc.contributor.authorSOMERVUO, Panu
dc.contributor.authorPALORINNE, Isabella
hal.structure.identifierUniversity of New England [UNE]
dc.contributor.authorANDREW, Nigel
dc.contributor.authorBABIY, Ulyana
dc.contributor.authorBAO, Tan
dc.contributor.authorBAZZANO, Gisela
dc.contributor.authorBONDARCHUK, Svetlana
hal.structure.identifierThe University of Hong Kong [HKU]
dc.contributor.authorBONEBRAKE, Timothy
hal.structure.identifierSchool of Natural Sciences, Bangor University, Bangor, United Kingdom
dc.contributor.authorBRENNAN, Georgina
hal.structure.identifierInstitute of Arctic Biology
dc.contributor.authorBRET-HARTE, Syndonia
hal.structure.identifierGoethe University Frankfurt
dc.contributor.authorBÄSSLER, Claus
hal.structure.identifierUniversidad de Córdoba = University of Córdoba [Córdoba]
dc.contributor.authorCAGNOLO, Luciano
hal.structure.identifierSaint Mary's University [Halifax]
dc.contributor.authorCAMERON, Erin
hal.structure.identifierUppsala University
hal.structure.identifierSwedish University of Agricultural Sciences = Sveriges lantbruksuniversitet [SLU]
dc.contributor.authorCHAPURLAT, Elodie
hal.structure.identifierBangor University
dc.contributor.authorCREER, Simon
dc.contributor.authorD’ACQUI, Luigi
dc.contributor.authorDE VERE, Natasha
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorDESPREZ-LOUSTAU, Marie-Laure
dc.contributor.authorDONGMO, Michel
dc.contributor.authorDYRHOLM JACOBSEN, Ida
hal.structure.identifierMadagascar Biodiversity Center
hal.structure.identifierCalifornia Academy of Sciences
dc.contributor.authorFISHER, Brian
dc.contributor.authorFLORES DE JESUS, Miguel
hal.structure.identifierUniversity of California [Santa Cruz] [UC Santa Cruz]
dc.contributor.authorGILBERT, Gregory
dc.contributor.authorGRIFFITH, Gareth
dc.contributor.authorGRITSUK, Anna
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
hal.structure.identifierSwiss Federal Institute for Forest, Snow and Landscape Research WSL
dc.contributor.authorGROSS, Andrin
hal.structure.identifierSwedish Polar Research Secretariat
dc.contributor.authorGRUDD, Håkan
hal.structure.identifierDepartment of Biological and Environmental Science [Jyväskylä Univ] [JYU]
dc.contributor.authorHALME, Panu
hal.structure.identifierInternational Institute of Tropical Agriculture [IITA-Benin]
dc.contributor.authorHANNA, Rachid
dc.contributor.authorHANSEN, Jannik
dc.contributor.authorHANSEN, Lars
dc.contributor.authorHEGBE, Apollon
dc.contributor.authorHILL, Sarah
dc.contributor.authorHOGG, Ian
dc.contributor.authorHULTMAN, Jenni
dc.contributor.authorHYDE, Kevin
dc.contributor.authorHYNSON, Nicole
dc.contributor.authorIVANOVA, Natalia
dc.contributor.authorKARISTO, Petteri
dc.contributor.authorKERDRAON, Deirdre
dc.contributor.authorKNORRE, Anastasia
dc.contributor.authorKRISAI-GREILHUBER, Irmgard
dc.contributor.authorKURHINEN, Juri
dc.contributor.authorKUZMINA, Masha
dc.contributor.authorLECOMTE, Nicolas
dc.contributor.authorLECOMTE, Erin
dc.contributor.authorLOAIZA, Viviana
dc.contributor.authorLUNDIN, Erik
dc.contributor.authorMEIRE, Alexander
dc.contributor.authorMEŠIĆ, Armin
dc.contributor.authorMIETTINEN, Otto
dc.contributor.authorMONKHAUSE, Norman
dc.contributor.authorMORTIMER, Peter
dc.contributor.authorMÜLLER, Jörg
dc.contributor.authorNILSSON, R. Henrik
dc.contributor.authorNONTI, Puani
dc.contributor.authorNORDÉN, Jenni
dc.contributor.authorNORDÉN, Björn
dc.contributor.authorPAZ, Claudia
dc.contributor.authorPELLIKKA, Petri
dc.contributor.authorPEREIRA, Danilo
dc.contributor.authorPETCH, Geoff
dc.contributor.authorPITKÄNEN, Juha-Matti
dc.contributor.authorPOPA, Flavius
dc.contributor.authorPOTTER, Caitlin
dc.contributor.authorPURHONEN, Jenna
dc.contributor.authorPÄTSI, Sanna
dc.contributor.authorRAFIQ, Abdullah
dc.contributor.authorRAHARINJANAHARY, Dimby
dc.contributor.authorRAKOS, Niklas
dc.contributor.authorRATHNAYAKA, Achala
dc.contributor.authorRAUNDRUP, Katrine
dc.contributor.authorREBRIEV, Yury
dc.contributor.authorRIKKINEN, Jouko
dc.contributor.authorROGERS, Hanna
dc.contributor.authorROGOVSKY, Andrey
dc.contributor.authorROZHKOV, Yuri
dc.contributor.authorRUNNEL, Kadri
dc.contributor.authorSAARTO, Annika
dc.contributor.authorSAVCHENKO, Anton
dc.contributor.authorSCHLEGEL, Markus
dc.contributor.authorSCHMIDT, Niels
dc.contributor.authorSEIBOLD, Sebastian
dc.contributor.authorSKJØTH, Carsten
dc.contributor.authorSTENGEL, Elisa
dc.contributor.authorSUTYRINA, Svetlana
dc.contributor.authorSYVÄNPERÄ, Ilkka
dc.contributor.authorTEDERSOO, Leho
dc.contributor.authorTIMM, Jebidiah
dc.contributor.authorTIPTON, Laura
dc.contributor.authorTOJU, Hirokazu
dc.contributor.authorUSCKA-PERZANOWSKA, Maria
dc.contributor.authorVAN DER BANK, Michelle
dc.contributor.authorHERMAN VAN DER BANK, F.
dc.contributor.authorVANDENBRINK, Bryan
dc.contributor.authorVENTURA, Stefano
dc.contributor.authorVIGNISSON, Solvi
dc.contributor.authorWANG, Xiaoyang
dc.contributor.authorWEISSER, Wolfgang
dc.contributor.authorWIJESINGHE, Subodini
dc.contributor.authorJOSEPH WRIGHT, S.
dc.contributor.authorYANG, Chunyan
dc.contributor.authorYOROU, Nourou
dc.contributor.authorYOUNG, Amanda
dc.contributor.authorYU, Douglas
dc.contributor.authorZAKHAROV, Evgeny
dc.contributor.authorHEBERT, Paul
dc.contributor.authorROSLIN, Tomas
dc.date.accessioned2025-04-19T02:02:01Z
dc.date.available2025-04-19T02:02:01Z
dc.date.issued2024-05-30
dc.identifier.issn2052-4463
dc.identifier.urihttps://oskar-bordeaux.fr/handle/20.500.12278/206340
dc.description.abstractEn<div><p>Novel methods for sampling and characterizing biodiversity hold great promise for reevaluating patterns of life across the planet. the sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and wellcalibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m 3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. to examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.</p></div>
dc.language.isoen
dc.publisherNature Publishing Group
dc.rights.urihttp://creativecommons.org/licenses/by/
dc.title.enGlobal Spore Sampling Project: A global, standardized dataset of airborne fungal DNA
dc.typeArticle de revue
dc.identifier.doi10.1038/s41597-024-03410-0
dc.subject.halSciences de l'environnement
bordeaux.journalScientific Data
bordeaux.page561
bordeaux.volume11
bordeaux.hal.laboratoriesBioGeCo (Biodiversité Gènes & Communautés) - UMR 1202*
bordeaux.issue1
bordeaux.institutionUniversité de Bordeaux
bordeaux.institutionINRAE
bordeaux.peerReviewedoui
hal.identifierhal-05039067
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-05039067v1
bordeaux.COinSctx_ver=Z39.88-2004&amp;rft_val_fmt=info:ofi/fmt:kev:mtx:journal&amp;rft.jtitle=Scientific%20Data&amp;rft.date=2024-05-30&amp;rft.volume=11&amp;rft.issue=1&amp;rft.spage=561&amp;rft.epage=561&amp;rft.eissn=2052-4463&amp;rft.issn=2052-4463&amp;rft.au=OVASKAINEN,%20Otso&amp;ABREGO,%20Nerea&amp;FURNEAUX,%20Brendan&amp;HARDWICK,%20Bess&amp;SOMERVUO,%20Panu&amp;rft.genre=article


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