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Enriching the FIDEO ontology with food-drug interactions from online knowledge sources
| dc.rights.license | open | en_US |
| hal.structure.identifier | Bordeaux population health [BPH] | |
| dc.contributor.author | AZZI, Rabia | |
| hal.structure.identifier | Bordeaux population health [BPH] | |
| dc.contributor.author | BORDEA, Georgeta | |
| hal.structure.identifier | Bordeaux population health [BPH] | |
| dc.contributor.author | GRIFFIER, Romain
IDREF: 252908562 | |
| dc.contributor.author | NIKIEMA, Jean Noel | |
| hal.structure.identifier | Bordeaux population health [BPH] | |
| dc.contributor.author | FLEUR, Mougin. | |
| dc.date.accessioned | 2024-04-30T11:03:43Z | |
| dc.date.available | 2024-04-30T11:03:43Z | |
| dc.date.issued | 2024-03-04 | |
| dc.identifier.issn | 2041-1480 | en_US |
| dc.identifier.uri | https://oskar-bordeaux.fr/handle/20.500.12278/199535 | |
| dc.description.abstractEn | The increasing number of articles on adverse interactions that may occur when specific foods are consumed with certain drugs makes it difficult to keep up with the latest findings. Conflicting information is available in the scientific literature and specialized knowledge bases because interactions are described in an unstructured or semi-structured format. The FIDEO ontology aims to integrate and represent information about food-drug interactions in a structured way. This article reports on the new version of this ontology in which more than 1700 interactions are integrated from two online resources: DrugBank and Hedrine. These food-drug interactions have been represented in FIDEO in the form of precompiled concepts, each of which specifies both the food and the drug involved. Additionally, competency questions that can be answered are reviewed, and avenues for further enrichment are discussed. | |
| dc.description.sponsorship | Maladies, Interactions Alimentation-Médicaments - ANR-16-CE23-0012 | en_US |
| dc.language.iso | EN | en_US |
| dc.rights | Attribution 3.0 United States | * |
| dc.rights.uri | http://creativecommons.org/licenses/by/3.0/us/ | * |
| dc.subject.en | Adverse drug effects | |
| dc.subject.en | Biomedical ontology | |
| dc.subject.en | FAIR principles | |
| dc.subject.en | Food-drug interactions | |
| dc.title.en | Enriching the FIDEO ontology with food-drug interactions from online knowledge sources | |
| dc.title.alternative | J Biomed Semantics | en_US |
| dc.type | Article de revue | en_US |
| dc.identifier.doi | 10.1186/s13326-024-00302-5 | en_US |
| dc.subject.hal | Sciences du Vivant [q-bio]/Santé publique et épidémiologie | en_US |
| dc.identifier.pubmed | 38438913 | en_US |
| dc.description.sponsorshipEurope | Knowledge graph completion using Artificial Neural Networks for Herb-Drug Interaction discovery | en_US |
| bordeaux.journal | Journal of Biomedical Semantics | en_US |
| bordeaux.volume | 15 | en_US |
| bordeaux.hal.laboratories | Bordeaux Population Health Research Center (BPH) - UMR 1219 | en_US |
| bordeaux.issue | 1 | en_US |
| bordeaux.institution | Université de Bordeaux | en_US |
| bordeaux.institution | INSERM | en_US |
| bordeaux.team | AHEAD_BPH | en_US |
| bordeaux.peerReviewed | oui | en_US |
| bordeaux.inpress | non | en_US |
| hal.identifier | hal-04564133 | |
| hal.version | 1 | |
| hal.date.transferred | 2024-04-30T11:03:45Z | |
| hal.popular | non | en_US |
| hal.audience | Internationale | en_US |
| hal.export | true | |
| dc.rights.cc | Pas de Licence CC | en_US |
| bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Journal%20of%20Biomedical%20Semantics&rft.date=2024-03-04&rft.volume=15&rft.issue=1&rft.eissn=2041-1480&rft.issn=2041-1480&rft.au=AZZI,%20Rabia&BORDEA,%20Georgeta&GRIFFIER,%20Romain&NIKIEMA,%20Jean%20Noel&FLEUR,%20Mougin.&rft.genre=article |
