Efficient numerical methods for simulating cardiac electrophysiology with cellular resolution
hal.structure.identifier | Zuse Institute Berlin [ZIB] | |
dc.contributor.author | CHEGINI, Fatemeh | |
hal.structure.identifier | Service Expérimentation et Développement [Bordeaux] [SED] | |
dc.contributor.author | FROEHLY, Algiane | |
hal.structure.identifier | Università degli Studi di Pavia [Italia] = University of Pavia [Italy] = Université de Pavie [Italie] [UNIPV] | |
dc.contributor.author | HUYNH, Ngoc | |
hal.structure.identifier | Università degli Studi di Pavia [Italia] = University of Pavia [Italy] = Université de Pavie [Italie] [UNIPV] | |
dc.contributor.author | PAVARINO, Luca F. | |
hal.structure.identifier | IHU-LIRYC | |
hal.structure.identifier | Modélisation et calculs pour l'électrophysiologie cardiaque [CARMEN] | |
hal.structure.identifier | Institut de Mathématiques de Bordeaux [IMB] | |
dc.contributor.author | POTSE, Mark | |
hal.structure.identifier | Università degli Studi di Milano = University of Milan [UNIMI] | |
dc.contributor.author | SCACCHI, Simone | |
hal.structure.identifier | Zuse Institute Berlin [ZIB] | |
dc.contributor.author | WEISER, Martin | |
dc.date.accessioned | 2024-04-04T02:30:58Z | |
dc.date.available | 2024-04-04T02:30:58Z | |
dc.date.conference | 2023-06-05 | |
dc.identifier.uri | https://oskar-bordeaux.fr/handle/20.500.12278/190278 | |
dc.description.abstractEn | The cardiac extracellular-membrane-intracellular (EMI) model enables the precise geometrical representation and resolution of aggregates of individual myocytes. As a result, it not only yields more accurate simulations of cardiac excitation compared to homogenized models but also presents the challenge of solving much larger problems. In this paper, we introduce recent advancements in three key areas: (i) the creation of artificial, yet realistic grids, (ii) efficient higher-order time stepping achieved by combining low-overhead spatial adaptivity on the algebraic level with progressive spectral deferred correction methods, and (iii) substructuring domain decomposition preconditioners tailored to address the complexities of heterogeneous problem structures. The efficiency gains of these proposed methods are demonstrated through numerical results on cardiac meshes of different sizes. | |
dc.language.iso | en | |
dc.rights.uri | http://creativecommons.org/licenses/by/ | |
dc.subject.en | EMI model | |
dc.subject.en | high-order time integration | |
dc.subject.en | spectral deferred correction | |
dc.subject.en | algebraic adaptivity | |
dc.subject.en | multirate integration scheme | |
dc.subject.en | ladder methods | |
dc.subject.en | BDDC preconditioner | |
dc.title.en | Efficient numerical methods for simulating cardiac electrophysiology with cellular resolution | |
dc.type | Communication dans un congrès | |
dc.subject.hal | Mathématiques [math]/Analyse numérique [math.NA] | |
dc.subject.hal | Informatique [cs]/Modélisation et simulation | |
dc.subject.hal | Sciences du Vivant [q-bio]/Médecine humaine et pathologie/Cardiologie et système cardiovasculaire | |
dc.description.sponsorshipEurope | Numerical modeling of cardiac electrophysiology at the cellular scale | |
bordeaux.hal.laboratories | Institut de Mathématiques de Bordeaux (IMB) - UMR 5251 | * |
bordeaux.institution | Université de Bordeaux | |
bordeaux.institution | Bordeaux INP | |
bordeaux.institution | CNRS | |
bordeaux.conference.title | COUPLED 2023 - 10th International Conference on Computational Methods for Coupled Problems in Science and Engineering | |
bordeaux.country | GR | |
bordeaux.conference.city | Chania | |
bordeaux.peerReviewed | oui | |
hal.identifier | hal-04407791 | |
hal.version | 1 | |
hal.invited | non | |
hal.proceedings | oui | |
hal.conference.end | 2023-06-07 | |
hal.popular | non | |
hal.audience | Internationale | |
hal.origin.link | https://hal.archives-ouvertes.fr//hal-04407791v1 | |
bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.au=CHEGINI,%20Fatemeh&FROEHLY,%20Algiane&HUYNH,%20Ngoc&PAVARINO,%20Luca%20F.&POTSE,%20Mark&rft.genre=unknown |
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