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Molecular Characterization of a Novel Species of <em>Capillovirus</em> from Japanese Apricot (<em>Prunus mume</em>).
| hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
| dc.contributor.author | MARAIS, Armelle | |
| hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
| dc.contributor.author | FAURE, Chantal | |
| hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
| dc.contributor.author | THEIL, Sébastien | |
| hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
| dc.contributor.author | CANDRESSE, Thierry | |
| dc.date.issued | 2018 | |
| dc.identifier.issn | 1999-4915 | |
| dc.description.abstractEn | With the increased use of high-throughput sequencing methods, new viruses infecting Prunus spp. are being discovered and characterized, especially in the family Betaflexiviridae. Double-stranded RNAs from symptomatic leaves of a Japanese apricot (Prunus mume) tree from Japan were purified and analyzed by Illumina sequencing. Blast comparisons of reconstructed contigs showed that the P. mume sample was infected by a putative novel virus with homologies to Cherry virus A (CVA) and to the newly described Currant virus A (CuVA), both members of genus Capillovirus. Completion of the genome showed the new agent to have a genomic organization typical of capilloviruses, with two overlapping open reading frames encoding a large replication-associated protein fused to the coat protein (CP), and a putative movement protein (MP). This virus shares only, respectively, 63.2% and 62.7% CP amino acid identity with the most closely related viruses, CVA and CuVA. Considering the species demarcation criteria in the family and phylogenetic analyses, this virus should be considered as representing a new viral species in the genus Capillovirus, for which the name of Mume virus A is proposed | |
| dc.language.iso | en | |
| dc.publisher | MDPI | |
| dc.rights.uri | http://creativecommons.org/licenses/by/ | |
| dc.subject.en | Betaflexiviridae | |
| dc.subject.en | Capillovirus | |
| dc.subject.en | Mume virus A | |
| dc.subject.en | Next Generation Sequencing | |
| dc.subject.en | fruit tree viruses | |
| dc.title.en | Molecular Characterization of a Novel Species of <em>Capillovirus</em> from Japanese Apricot (<em>Prunus mume</em>). | |
| dc.type | Article de revue | |
| dc.identifier.doi | 10.3390/v10040144 | |
| dc.subject.hal | Sciences du Vivant [q-bio]/Microbiologie et Parasitologie/Virologie | |
| bordeaux.journal | Viruses | |
| bordeaux.page | 144 | |
| bordeaux.volume | 10 | |
| bordeaux.peerReviewed | oui | |
| hal.identifier | hal-02624911 | |
| hal.version | 1 | |
| hal.popular | non | |
| hal.audience | Internationale | |
| hal.origin.link | https://hal.archives-ouvertes.fr//hal-02624911v1 | |
| bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Viruses&rft.date=2018&rft.volume=10&rft.spage=144&rft.epage=144&rft.eissn=1999-4915&rft.issn=1999-4915&rft.au=MARAIS,%20Armelle&FAURE,%20Chantal&THEIL,%20S%C3%A9bastien&CANDRESSE,%20Thierry&rft.genre=article |
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