Afficher la notice abrégée

Towards the Rose Genome Sequence and Its Use in Research and Breeding

hal.structure.identifierInstitut de Recherche en Horticulture et Semences [IRHS]
dc.contributor.authorFOUCHER, Fabrice
hal.structure.identifierInstitut de Recherche en Horticulture et Semences [IRHS]
dc.contributor.authorHIBRAND-SAINT OYANT, Laurence
hal.structure.identifierInstitut de Recherche en Horticulture et Semences [IRHS]
dc.contributor.authorHAMAMA, Latifa
hal.structure.identifierInstitut de Recherche en Horticulture et Semences [IRHS]
dc.contributor.authorSAKR, Soulaiman
hal.structure.identifierSwedish University of Agricultural Sciences = Sveriges lantbruksuniversitet [SLU]
dc.contributor.authorNYBOM, H.
hal.structure.identifierUniversité de Rouen Normandie [UNIROUEN]
dc.contributor.authorBAUDINO, S.
hal.structure.identifierUniversité de Rouen Normandie [UNIROUEN]
dc.contributor.authorCAISSARD, J.P.
hal.structure.identifierTexas A&M University System
dc.contributor.authorBYRNE, D.M.
hal.structure.identifierWageningen University and Research Centre [WUR]
dc.contributor.authorSMULDER, J.M.S.
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorDENOYES, Beatrice
hal.structure.identifierInst Plant Genet
dc.contributor.authorDEBENER, T.
hal.structure.identifierMontreal Botanical Garden
dc.contributor.authorBRUNEAU, A.
hal.structure.identifierResearch Institute for Agricultural, Fisheries and Food [ILVO]
dc.contributor.authorDE RIEK, J.
hal.structure.identifierNagoya University
dc.contributor.authorMATSUMOTO, S.
hal.structure.identifierInstituto Andaluz de Investigación y Formación Agraria y Pesquera [IFAPA]
dc.contributor.authorTORRES, A.
hal.structure.identifierInstituto Andaluz de Investigación y Formación Agraria y Pesquera [IFAPA]
dc.contributor.authorMILLAN, T.
hal.structure.identifierInstituto Andaluz de Investigación y Formación Agraria y Pesquera [IFAPA]
dc.contributor.authorAMAYA, I.
hal.structure.identifierChubu University
dc.contributor.authorYAMADA, K.
hal.structure.identifierCommissariat à l'énergie atomique et aux énergies alternatives [CEA]
dc.contributor.authorWINCKER, P.
hal.structure.identifierThe Hebrew University of Jerusalem [HUJ]
dc.contributor.authorZAMIR, D.
hal.structure.identifierLaboratoire des interactions plantes micro-organismes [LIPM]
dc.contributor.authorGOUZY, Jerome
hal.structure.identifierCentro Ricerca e Innovazione, Fondazione Edmund Mach
dc.contributor.authorSARGENT, D.
hal.structure.identifierReproduction et développement des plantes [RDP]
dc.contributor.authorBENDAHMANE, Mohammed
hal.structure.identifierReproduction et développement des plantes [RDP]
dc.contributor.authorRAYMOND, Olivier
hal.structure.identifierReproduction et développement des plantes [RDP]
dc.contributor.authorVERGNE, Philippe
dc.contributor.authorDUBOIS, André
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorJUST, Daniel
dc.date.issued2015
dc.identifier.issn0567-7572
dc.description.abstractEnRose is one of the most economically important ornamental crops worldwide. Rosa sp. can become a model for woody ornamentals. Its genome size is relatively small (560 Mb), its genetic history with ploidy events is well documented, and rose has a short life for a woody plant. Furthermore, different tools are available, including transcriptomic tools, genetic maps and genetic transformation protocols. Rose represents an original model for studying some ornamental traits that cannot be addressed in other model plant species such as Arabidopsis. Some of these traits, such recurrent blooming, flower morphogenesis or scent production and emission, are of economic interest. Different groups involved in rose genetics and genomics gathered to form the 'Rose Genome Sequence Initiative'. Our objective is to obtain a high quality rose genome sequence of the diploid R. chinensis 'Old Blush'. One important issue is the high level of heterozygosity of roses. To tackle this issue, different strategies are proposed: production of a haploid and development a high density genetic map to anchor the genome. This genetic map will be developed from a cross between 'Old Blush' and R. wichurana. The genotype R. chinensis 'Old Blush' will be sequenced using NGS technologies. The data will be assembled and arranged using the high-density map. In order to increase ESTs and to facilitate genome annotation, we have recently produced ESTs from various tissues of 'Old Blush' under different conditions. Digital expression (RNA Seq) was obtained from the different tissues and data are available on the following web site (https://iant.toulouse.inra.fr/plants/rosa/FATAL/). The rose genome sequence will be a great step to help identifying the molecular basis of ornamental traits and also to study genetic diversity and genome evolution in the genus Rosa and in the Rosaceae family.
dc.language.isoen
dc.publisherInternational Society for Horticultural Science
dc.subjectRosa
dc.subjectgenomics
dc.subject.enold blush
dc.subject.enheterozygous
dc.subject.enornamental
dc.title.enTowards the Rose Genome Sequence and Its Use in Research and Breeding
dc.typeArticle de revue
dc.identifier.doi10.17660/ActaHortic.2015.1064.19
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale
bordeaux.journalActa Horticulturae
bordeaux.page167-175
bordeaux.issue1064
bordeaux.peerReviewedoui
hal.identifierhal-02630890
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02630890v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Acta%20Horticulturae&rft.date=2015&rft.issue=1064&rft.spage=167-175&rft.epage=167-175&rft.eissn=0567-7572&rft.issn=0567-7572&rft.au=FOUCHER,%20Fabrice&HIBRAND-SAINT%20OYANT,%20Laurence&HAMAMA,%20Latifa&SAKR,%20Soulaiman&NYBOM,%20H.&rft.genre=article


Fichier(s) constituant ce document

FichiersTailleFormatVue

Il n'y a pas de fichiers associés à ce document.

Ce document figure dans la(les) collection(s) suivante(s)

Afficher la notice abrégée