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After the data deluge: biological characterization of the new variants and viral species identified by NGS

hal.structure.identifierGembloux Agro-BioTech
dc.contributor.authorMASSART, Sébastien
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
hal.structure.identifierSwedish University of Agricultural Sciences = Sveriges lantbruksuniversitet [SLU]
dc.contributor.authorGIL, José
hal.structure.identifierScience and Advice for Scottish Agriculture
dc.contributor.authorLACOMME, Christophe
hal.structure.identifierBiomedical Research Center SAS
dc.contributor.authorPREDAJŇA, Lukáš
hal.structure.identifierNational Institute of Biology [Ljubljana] [NIB]
dc.contributor.authorRAVNIKAR, Maja
hal.structure.identifierAgroscope
dc.contributor.authorREYNARD, Jean-Sébastien
hal.structure.identifierHumboldt-Universität zu Berlin = Humboldt University of Berlin = Université Humboldt de Berlin [HU Berlin]
dc.contributor.authorRUMBOU, Artemis
hal.structure.identifierNational Research Council of Italy | Consiglio Nazionale delle Ricerche [CNR]
dc.contributor.authorSALDARELLI, Pasquale
hal.structure.identifierNatural Resources Institute Finland [LUKE]
dc.contributor.authorVAINIO, Eeva J
hal.structure.identifierHelsingin yliopisto = Helsingfors universitet = University of Helsinki
dc.contributor.authorVALKONEN, Jari P. T.
hal.structure.identifierGembloux Agro-BioTech
dc.contributor.authorVANDERSCHUREN, Hervé
hal.structure.identifierDienstleistungszentren Landlicher Raum Rheinland-Pfalz [DLR]
dc.contributor.authorWETZEL, Thierry
dc.date.issued2018
dc.date.conference2018-07-29
dc.description.abstractEnRecent advances in high-throughput sequencing technologies and bioinformatics have generated huge new opportunities for discovering and diagnosing plant viruses and viroids. Plant virology has undoubtedly benefited from these new methodologies, but at the same time, faces now substantial bottlenecks, namely the biological characterization of the newly discovered viruses and the analysis of their impact at the biosecurity, commercial, regulatory, and scientific levels. This paper proposes a scaled and progressive scientific framework for efficient biological characterization and risk assessment when a previously known or a new plant virus is detected by next generation sequencing (NGS) technologies.
dc.language.isoen
dc.publisherAPS press
dc.publisher.locationSt Paul Minnesota (united states)
dc.rights.urihttp://creativecommons.org/licenses/by/
dc.source.titlePhytopathology
dc.title.enAfter the data deluge: biological characterization of the new variants and viral species identified by NGS
dc.typeCommunication dans un congrès
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie
dc.subject.halSciences du Vivant [q-bio]/Microbiologie et Parasitologie/Virologie
bordeaux.volume108 (10) Supplt.
bordeaux.issue10
bordeaux.conference.titleInternational Congress of Plant Pathology (ICPP)
bordeaux.countryUS
bordeaux.title.proceedingPhytopathology
bordeaux.conference.cityBoston
bordeaux.peerReviewedoui
hal.identifierhal-02735413
hal.version1
hal.invitednon
hal.proceedingsnon
hal.conference.end2018-08-03
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02735413v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.btitle=Phytopathology&rft.date=2018&rft.volume=108%20(10)%20Supplt.&rft.issue=10&rft.au=MASSART,%20S%C3%A9bastien&CANDRESSE,%20Thierry&GIL,%20Jos%C3%A9&LACOMME,%20Christophe&PREDAJ%C5%87A,%20Luk%C3%A1%C5%A1&rft.genre=unknown


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