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Molecular Characterization of the Complete Coding Sequence of Olive Leaf Yellowing-Associated Virus
hal.structure.identifier | Instituto Valenciano de Investigaciones Agrarias - Institut Valencià d'Investigacions Agraries - Valencian Institute for agricultural Research [IVIA] | |
dc.contributor.author | RUIZ-GARCÍA, Ana Belén | |
hal.structure.identifier | Biologie du fruit et pathologie [BFP] | |
dc.contributor.author | CANDRESSE, Thierry | |
hal.structure.identifier | Instituto Valenciano de Investigaciones Agrarias - Institut Valencià d'Investigacions Agraries - Valencian Institute for agricultural Research [IVIA] | |
dc.contributor.author | CANALES, Celia | |
hal.structure.identifier | Instituto Valenciano de Investigaciones Agrarias - Institut Valencià d'Investigacions Agraries - Valencian Institute for agricultural Research [IVIA] | |
dc.contributor.author | MORÁN, Félix | |
hal.structure.identifier | Universidade Federal do Rio Grande do Sul [Porto Alegre] [UFRGS] | |
dc.contributor.author | MACHADO DE OLIVEIRA, Carlos | |
hal.structure.identifier | Universidade Federal do Rio Grande do Sul [Porto Alegre] [UFRGS] | |
dc.contributor.author | BERTOLINI, Edson | |
hal.structure.identifier | Instituto Valenciano de Investigaciones Agrarias - Institut Valencià d'Investigacions Agraries - Valencian Institute for agricultural Research [IVIA] | |
dc.contributor.author | OLMOS, Antonio | |
dc.date.issued | 2020 | |
dc.identifier.issn | 2223-7747 | |
dc.description.abstractEn | Genome organization and phylogenetic relationships of olive leaf yellowing-associated virus (OLYaV) with other members of the Closteroviridae family were determined. The complete coding sequence of OLYaV was obtained by high throughput sequencing of total RNA from a 35-year-old olive tree (cv. Zarzaleña) from Brazil, showing olive leaf yellowing disease and deformations in the wood. This represents the first report of OLYaV in this country. A genomic sequence of 16,700 nt containing 11 open reading frames (ORFs) was recovered, representing the complete virus coding capacity. The knowledge of the nucleotide sequence of the genome including the gene that codes the coat protein will facilitate the development of diagnostic tests, which are limited so far to PCR-based methods targeting the HSP70h gene. Interestingly, a thaumatin-like protein (ORF2), previously reported in other unassigned viruses in the Closteroviridae family, persimmon virus B and actidinia virus 1, was identified in the OLYaV genome. Phylogenetic analysis of shared proteins (ORF1a, ORF1b, HSP70h, HSP90h and CP) with all members of the Closteroviridae family provides new insight into the taxonomic position of these three closteroviruses and suggests they could represent a new genus in the family. | |
dc.language.iso | en | |
dc.publisher | MDPI | |
dc.rights.uri | http://creativecommons.org/licenses/by/ | |
dc.subject | virologie végétale | |
dc.subject | virus phytopathogène | |
dc.subject.en | Closteroviridae | |
dc.subject.en | thaumatin-like protein | |
dc.subject.en | genome | |
dc.subject.en | high-throughput sequencing | |
dc.title.en | Molecular Characterization of the Complete Coding Sequence of Olive Leaf Yellowing-Associated Virus | |
dc.type | Article de revue | |
dc.identifier.doi | 10.3390/plants9101272 | |
dc.subject.hal | Sciences du Vivant [q-bio] | |
dc.subject.hal | Sciences du Vivant [q-bio]/Biologie végétale | |
dc.subject.hal | Sciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie | |
bordeaux.journal | Plants | |
bordeaux.page | 1272 | |
bordeaux.volume | 9 | |
bordeaux.issue | 10 | |
bordeaux.peerReviewed | oui | |
hal.identifier | hal-02955256 | |
hal.version | 1 | |
hal.origin.link | https://hal.archives-ouvertes.fr//hal-02955256v1 | |
bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Plants&rft.date=2020&rft.volume=9&rft.issue=10&rft.spage=1272&rft.epage=1272&rft.eissn=2223-7747&rft.issn=2223-7747&rft.au=RUIZ-GARC%C3%8DA,%20Ana%20Bel%C3%A9n&CANDRESSE,%20Thierry&CANALES,%20Celia&MOR%C3%81N,%20F%C3%A9lix&MACHADO%20DE%20OLIVEIRA,%20Carlos&rft.genre=article |
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