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A novel foveavirus identified in wild grapevine (Vitis vinifera subsp. sylvestris)

hal.structure.identifierAgroscope
dc.contributor.authorREYNARD, Jean-Sébastien
hal.structure.identifierAgroscope
dc.contributor.authorBRODARD, Justine
hal.structure.identifierAgroscope
dc.contributor.authorREMOLIFF, Eric
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorLEFEBVRE, Marie
hal.structure.identifierAgroscope
dc.contributor.authorSCHUMPP, Olivier
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
dc.date.issued2020
dc.identifier.issn0304-8608
dc.description.abstractEnWe report the genome sequence of a putative new foveavirus infecting non-cultivated Vitis vinifera, tentatively named "grapevine foveavirus A" (GFVA). This virus was identified by high-throughput sequencing analysis of a European wild Vitis collected in Switzerland. Phylogenetic analysis revealed that this virus clustered with known grapevine virus T (GVT) isolates but was clearly distinct from any of them. If considering the International Committee of Taxonomy of Viruses (ICTV)-suggested foveavirus species demarcation criterion based on sequence similarity in the replicase gene/protein, this virus should be considered a member of a new species closely related to GVT. On the other hand, comparison of capsid gene/ protein sequences using the same criteria indicates that GFVA is at the border of species demarcation. Whether this virus represents a highly divergent GVT isolate or a member of a distinct but closely related species is discussed.
dc.language.isoen
dc.publisherSpringer Verlag
dc.rights.urihttp://creativecommons.org/licenses/by/
dc.subjectpathologie végétale
dc.subjectsanté des plantes
dc.subjectvirologie végétale
dc.subjectvirus phytopathogène
dc.subjectVitis vinifera subsp. sylvestris
dc.subjectvigne
dc.subjectfoveavirus
dc.subject.engrapevine foveavirus A
dc.subject.enhigh-throughput sequencing
dc.subject.enidentification
dc.title.enA novel foveavirus identified in wild grapevine (Vitis vinifera subsp. sylvestris)
dc.typeArticle de revue
dc.identifier.doi10.1007/s00705-020-04817-x
dc.subject.halSciences du Vivant [q-bio]
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie
bordeaux.journalArchives of Virology
bordeaux.page2999 - 3002
bordeaux.volume165
bordeaux.issue12
bordeaux.peerReviewedoui
hal.identifierhal-02983032
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02983032v1
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