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Complete genome sequence of almond luteovirus 1, a novel luteovirus infecting almond

hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorKHALILI, Maryam
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorFAURE, Chantal
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorMARAIS, Armelle
dc.date.issued2020
dc.identifier.issn0304-8608
dc.description.abstractEnIn this study, we report the complete genome sequence of a novel luteovirus detected in almonds using high-throughput sequencing. The genome of the new luteovirus comprises 5,047 nucleotides, and its genomic organization is similar to that of the recently described nectarine stem pitting associated virus (NSPaV), with only four open reading frames encoding for replication related proteins, the coat protein (CP) and a CP readthrough protein involved in the aphid transmission of luteovirids. Phylogenic and pairwise distance analyses showed that this virus shares 79% and 57.8% amino acid identities in the P1-P2 fusion protein and the P3-P5 protein, respectively, with the most closely related luteovirus NSPaV, suggesting that it represents a novel species for which the name of Almond associated luteovirus 1 is proposed. To our knowledge, this is the first report of an almond-infecting luteovirus.
dc.language.isoen
dc.publisherSpringer Verlag
dc.subjectfruit à coque
dc.subjectplante fruitière
dc.subjectvirus phytopathogène
dc.subjectpathologie végétale
dc.subjectvirologie végétale
dc.subject.enLuteoviridae
dc.subject.enLuteovirus
dc.subject.enalmond luteovirus
dc.subject.enalmond
dc.subject.enGenome sequence
dc.subject.enGenome
dc.subject.enstone fruits
dc.subject.envirome
dc.subject.enhigh-throughput sequencing
dc.subject.enPrunus Arch. Virol. Annotated sequence record -Almond luteovirus 1
dc.title.enComplete genome sequence of almond luteovirus 1, a novel luteovirus infecting almond
dc.typeArticle de revue
dc.identifier.doi10.1007/s00705-020-04715-2
dc.subject.halSciences du Vivant [q-bio]
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie
bordeaux.journalArchives of Virology
bordeaux.page2123-2126
bordeaux.volume165
bordeaux.issue9
bordeaux.peerReviewedoui
hal.identifierhal-02903557
hal.version1
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02903557v1
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