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Development of highly validated SNP markers for genetic analyses of chestnut species

hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
hal.structure.identifierInvenio
dc.contributor.authorLARUE, Clément
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorGUICHOUX, Erwan
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorLAURENT, Benoît
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorBARRENECHE, Teresa
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorROBIN, Cécile
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorMASSOT, Marie
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorDELCAMP, Adline
hal.structure.identifierBiodiversité, Gènes & Communautés [BioGeCo]
dc.contributor.authorJ. PETIT, Rémy
dc.date.issued2021
dc.identifier.issn1877-7252
dc.description.abstractEnTo better study and manage chestnut trees and species, we identified nuclear single nucleotide polymorphism (SNP) markers using restriction-associated DNA sequencing. Out of 343 loci tested, 68 SNP markers were selected that withhold stringent quality criteria such as quasi-systematic amplification across species and Mendelian segregation in both purebred and hybrid individuals. They provide sufficient power for species, hybrids and backcross characterization as well as for clonal identification, as shown by a comparison with single sequenced repeat (SSR) loci.
dc.description.sponsorshipPlateforme d'Innovation " Forêt-Bois-Fibre-Biomasse du Futur " - ANR-10-EQPX-0016
dc.language.isoen
dc.publisherSpringer
dc.subject.enFagaceae
dc.subject.enCastanea sp.
dc.subject.enSingle nucleotide polymorphism
dc.subject.enMassARRAY
dc.title.enDevelopment of highly validated SNP markers for genetic analyses of chestnut species
dc.typeArticle de revue
dc.identifier.doi10.1007/s12686-021-01220-9
dc.subject.halSciences du Vivant [q-bio]
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Amélioration des plantes
bordeaux.journalConservation Genetics Resources
bordeaux.page383-388
bordeaux.volume13
bordeaux.peerReviewedoui
hal.identifierhal-03273580
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-03273580v1
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