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Identification of two novel putative satellite RNAs with hammerhead structures in the virome of French and Spanish carrot samples

hal.structure.identifierUniversidad Politécnica de Madrid [UPM]
dc.contributor.authorBABALOLA, B
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorSCHÖNEGGER, Deborah
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorFAURE, Chantal
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorMARAIS, Armelle
hal.structure.identifierUniversidad Politécnica de Madrid [UPM]
dc.contributor.authorFRAILE, A.
hal.structure.identifierUniversidad Politécnica de Madrid [UPM]
dc.contributor.authorGARCIA-ARENAL, F.
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
dc.date.issued2022
dc.identifier.issn0304-8608
dc.description.abstractEnCarrot virome analysis using high-throughput sequencing revealed the presence of two RNA molecules with properties of satellite RNAs and homologous to the satellite RNA of cereal yellow dwarf virus-RPV (CYDV-RPV). Satellite 1 is 298 nt long, while Satellite 2 is 368 nt long. Their positive and negative genome strands contain hammerhead ribozymes similar to those found in other self-cleaving satellite RNAs. While both satellites were detected in Spanish carrot populations, only satellite 2 was found in French carrot populations. The most likely helper virus for these two satellites is carrot red leaf virus (CtRLV), which similar to CYDV-RPV is a Polerovirus.
dc.language.isoen
dc.publisherSpringer Verlag
dc.subject.ensatellite
dc.subject.enhigh-throughput sequencing
dc.subject.enribozyme
dc.subject.enPolerovirus
dc.title.enIdentification of two novel putative satellite RNAs with hammerhead structures in the virome of French and Spanish carrot samples
dc.typeArticle de revue
dc.identifier.doi10.1007/s00705-022-05538-z
dc.subject.halSciences du Vivant [q-bio]
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie
dc.description.sponsorshipEuropeHorizon 2020 Marie Skłodowska-Curie Actions Innovative Training Network (H2020 MSCA-60 ITN)
bordeaux.journalArchives of Virology
bordeaux.page2287-2292
bordeaux.volume167
bordeaux.issue11
bordeaux.peerReviewedoui
hal.identifierhal-03749075
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-03749075v1
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