The WRKY transcription factor family in citrus: valuable and useful candidate genes for citrus breeding
Idioma
EN
Article de revue
Este ítem está publicado en
Applied Biochemistry and Biotechnology. 2016, vol. 180, n° 3, p. 516-543
Resumen en inglés
WRKY transcription factors belong to a large family of plant transcriptional regulators whose members have been reported to be involved in a wide range of biological roles including plant development, adaptation to ...Leer más >
WRKY transcription factors belong to a large family of plant transcriptional regulators whose members have been reported to be involved in a wide range of biological roles including plant development, adaptation to environmental constraints and response to several diseases. However, little or poor information is available about WRKY's in Citrus. The recent release of completely assembled genomes sequences of Citrus sinensis and Citrus clementina and the availability of ESTs sequences from other citrus species allowed us to perform a genome survey for Citrus WRKY proteins. In the present study, we identified 100 WRKY members from C. sinensis (51), C. clementina (48) and Citrus unshiu (1), and analyzed their chromosomal distribution, gene structure, gene duplication, syntenic relation and phylogenetic analysis. A phylogenetic tree of 100 Citrus WRKY sequences with their orthologs from Arabidopsis has distinguished seven groups. The CsWRKY genes were distributed across all ten sweet orange chromosomes. A comprehensive approach and an integrative analysis of Citrus WRKY gene expression revealed variable profiles of expression within tissues and stress conditions indicating functional diversification. Thus, candidate Citrus WRKY genes have been proposed as potentially involved in fruit acidification, essential oil biosynthesis and abiotic/biotic stress tolerance. Our results provided essential prerequisites for further WRKY genes cloning and functional analysis with an aim of citrus crop improvement.< Leer menos
Palabras clave
Facteur de transcription
Régulateur de transcription
Citrus
Séquençage du génome
Analyse phylogénétique
Duplication de gènes
Palabras clave en inglés
Wrky
Citrus
Essential Oil Biosynthesis
Fruit Acidification
Stress Tolerance
Zinc Finger
Centros de investigación