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hal.structure.identifierSanté de la vigne et qualité du vin [SVQV]
dc.contributor.authorHILY, Jean-Michel
hal.structure.identifierSanté de la vigne et qualité du vin [SVQV]
dc.contributor.authorBEUVE, Monique
hal.structure.identifierSanté de la vigne et qualité du vin [SVQV]
dc.contributor.authorVIGNE, Emmanuelle
hal.structure.identifierSanté de la vigne et qualité du vin [SVQV]
dc.contributor.authorDEMANGEAT, Gerard
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
hal.structure.identifierSanté de la vigne et qualité du vin [SVQV]
dc.contributor.authorLEMAIRE, Olivier
dc.date.issued2018
dc.identifier.issn0304-8608
dc.description.abstractEnOver the last decade, many scientific disciplines have been impacted by the dawn of new sequencing techniques (HTS: high throughput sequencing). Plant pathology and more specifically virology have been greatly transformed by this 'metagenomics' paradigm shift. Such tools significantly facilitate disease diagnostics with tremendous sensitivity, providing invaluable information such as an exhaustive list of viruses being present in a sample as well as their relative concentration. In addition, many new plant viruses have been discovered. Using RNAseq technology, in silico reconstruction of complete viral genome sequences is easily attainable. This step is of importance for taxonomy, population structure analyses, phylogeography and viral evolution studies. Here, after assembling 81 new near-complete genome sequences of grapevine rupestris stem pitting-associated virus (GRSPaV), we performed a genome-wide diversity study of this ubiquitous virus of grapevine worldwide.
dc.language.isoen
dc.publisherSpringer Verlag
dc.subjectGRSPaV
dc.subject.engrapevine rupestris stem pitting-associated virus
dc.subject.engenome wide diversity study
dc.title.enA genome-wide diversity study of grapevine rupestris stem pitting-associated virus.
dc.typeArticle de revue
dc.identifier.doi10.1007/s00705-018-3945-0
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie
dc.subject.halSciences du Vivant [q-bio]/Microbiologie et Parasitologie/Virologie
bordeaux.journalArchives of Virology
bordeaux.page3105-3111
bordeaux.volume163
bordeaux.issue11
bordeaux.peerReviewedoui
hal.identifierhal-02628821
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02628821v1
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