A genome-wide diversity study of grapevine rupestris stem pitting-associated virus.
Idioma
en
Article de revue
Este ítem está publicado en
Archives of Virology. 2018, vol. 163, n° 11, p. 3105-3111
Springer Verlag
Resumen en inglés
Over the last decade, many scientific disciplines have been impacted by the dawn of new sequencing techniques (HTS: high throughput sequencing). Plant pathology and more specifically virology have been greatly transformed ...Leer más >
Over the last decade, many scientific disciplines have been impacted by the dawn of new sequencing techniques (HTS: high throughput sequencing). Plant pathology and more specifically virology have been greatly transformed by this 'metagenomics' paradigm shift. Such tools significantly facilitate disease diagnostics with tremendous sensitivity, providing invaluable information such as an exhaustive list of viruses being present in a sample as well as their relative concentration. In addition, many new plant viruses have been discovered. Using RNAseq technology, in silico reconstruction of complete viral genome sequences is easily attainable. This step is of importance for taxonomy, population structure analyses, phylogeography and viral evolution studies. Here, after assembling 81 new near-complete genome sequences of grapevine rupestris stem pitting-associated virus (GRSPaV), we performed a genome-wide diversity study of this ubiquitous virus of grapevine worldwide.< Leer menos
Palabras clave
GRSPaV
Palabras clave en inglés
grapevine rupestris stem pitting-associated virus
genome wide diversity study
Orígen
Importado de HalCentros de investigación