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hal.structure.identifierSlovak Academy of Sciences [SAS]
dc.contributor.authorGLASA, Miroslav
hal.structure.identifierSlovak Academy of Sciences [SAS]
dc.contributor.authorPREDAJŇA, Lukáš
hal.structure.identifierCrop research institute
dc.contributor.authorKOMÍNEK, Petr
hal.structure.identifierSlovak Academy of Sciences [SAS]
dc.contributor.authorNAGYOVÁ, Alžbeta
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
hal.structure.identifierInstituto Valenciano de Investigaciones Agrarias - Institut Valencià d'Investigacions Agraries - Valencian Institute for agricultural Research [IVIA]
dc.contributor.authorOLMOS, Antonio
dc.date.issued2014
dc.identifier.issn0304-8608
dc.description.abstractEnAnalysis of complete genome sequences of three Slovak isolates of grapevine Pinot gris virus (GPGV) showed their low heterogeneity (reaching 1.7 %) and a close relationship to the Italian NC_015782 isolate (4.2-4.5 % divergence). Comparison of Slovak and Italian isolates revealed an unusual accumulation of 21 indel mutations in ORF1, resulting in a localized high divergence in the encoded amino acid sequences. An elevated divergence in the 5' extremity of the GPGV genomes is suggestive of a recombination between Slovak isolates and grapevine berry inner necrosis virus. RT-PCR allowed the frequent detection of closely related GPGV isolates in grapevines from Slovakia and the Czech Republic.
dc.language.isoen
dc.publisherSpringer Verlag
dc.subject.enTrichovirus
dc.subject.enNext-generation sequencing
dc.subject.enDiversity
dc.subject.enDetection
dc.title.enMolecular characterization of divergent grapevine Pinot gris virus isolates and their detection in Slovak and Czech grapevines.
dc.typeArticle de revue
dc.identifier.doi10.1007/s00705-014-2031-5
dc.subject.halSciences du Vivant [q-bio]/Autre [q-bio.OT]
bordeaux.journalArchives of Virology
bordeaux.page2103-2107
bordeaux.volume159
bordeaux.issue8
bordeaux.peerReviewedoui
hal.identifierhal-02635271
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02635271v1
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