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The complete genome sequence of Candidatus Liberibacter americanus, associated with citrus Huanglongbing.

dc.contributor.authorWULFF, Nelson Arno
hal.structure.identifierUniversity of Florida [Gainesville] [UF]
dc.contributor.authorZHANG, Shujian
hal.structure.identifierUniversidade de São Paulo = University of São Paulo [USP]
dc.contributor.authorSETUBAL, João C
hal.structure.identifierUniversidade Federal de Mato Grosso do Sul [UFMS]
dc.contributor.authorALMEIDA, Nalvo F
dc.contributor.authorMARTINS, Elaine C
hal.structure.identifierInstituto Biologico
dc.contributor.authorHARAKAVA, Ricardo
hal.structure.identifierUniversity of Florida [Gainesville] [UF]
dc.contributor.authorKUMAR, Dibyendu
hal.structure.identifierUniversidade de São Paulo = University of São Paulo [USP]
dc.contributor.authorRANGEL, Luiz T
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorFOISSAC, Xavier
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorBOVE, Joseph
hal.structure.identifierUniversity of Florida [Gainesville] [UF]
dc.contributor.authorGABRIEL, Dean W
dc.date.issued2014
dc.identifier.issn0894-0282
dc.description.abstractEnLiberibacters form a Rhizobiaceae clade of phloem-limited pathogens of limited host range. Two obligately parasitic species have been sequenced: Candidatus Liberibacter asiaticus (Las), which causes citrus Huanglongbing (HLB) world-wide, and Ca. L. solanacearum (Lso), which causes potato "zebra chip" disease. A third species, Liberibacter crescens (Lcr), was isolated from mountain papaya, grown in axenic culture and sequenced. In an effort to identify common host determinants, the complete genomic DNA sequence of a second HLB species, Ca. L. americanus (Lam) strain "São Paulo" was determined. The circular genome of 1,195,201 bp had an average 31.12% GC content and 983 predicted protein encoding genes, 800 (81.4%) of which had a predicted function. There were 658 genes common to all sequenced liberibacters and only 8 genes common to Lam and Las but not found in Lso. Surprisingly, most of the lipopolysaccharide biosynthetic genes were missing from the Lam genome, as well OmpA and a key regulator of flagellin, all indicating a Lam strategy of avoiding production of major pathogen-associated molecular patterns (PAMPs) present in Las and Lso. As with Las, one of two Lam prophages replicated as an excision plasmid and carried potential lysogenic conversion genes that appeared fragmentary or degenerated in Lso.
dc.language.isoen
dc.publisherAmerican Phytopathological Society
dc.title.enThe complete genome sequence of Candidatus Liberibacter americanus, associated with citrus Huanglongbing.
dc.typeArticle de revue
dc.identifier.doi10.1094/MPMI-09-13-0292-R
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale
bordeaux.journalMolecular Plant-Microbe Interactions
bordeaux.page163-176
bordeaux.volume27
bordeaux.issue2
bordeaux.peerReviewedoui
hal.identifierhal-02639402
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02639402v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Molecular%20Plant-Microbe%20Interactions&rft.date=2014&rft.volume=27&rft.issue=2&rft.spage=163-176&rft.epage=163-176&rft.eissn=0894-0282&rft.issn=0894-0282&rft.au=WULFF,%20Nelson%20Arno&ZHANG,%20Shujian&SETUBAL,%20Jo%C3%A3o%20C&ALMEIDA,%20Nalvo%20F&MARTINS,%20Elaine%20C&rft.genre=article


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