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Family-based linkage and association mapping reveals novel genes affecting Plum pox virus infection in Arabidopsis thaliana

hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorPAGNY, Gaelle
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorPAULSTEPHENRAJ, Pauline Sandra
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorPOQUE, Sylvain
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorSICARD, Ophélie
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCOSSON, Patrick
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorEYQUARD, Jean-Philippe
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCABALLERO, Mélodie
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCHAGUE, Aurélie
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorGOURDON, Germain
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorNEGREL, Lise
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorCANDRESSE, Thierry
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorMARIETTE, Stéphanie
hal.structure.identifierBiologie du fruit et pathologie [BFP]
dc.contributor.authorDECROOCQ, Véronique
dc.date.issued2012
dc.identifier.issn0028-646X
dc.description.abstractEnSharka is a devastating viral disease caused by the Plum pox virus (PPV) in stone fruit trees and few sources of resistance are known in its natural hosts. Since any knowledge gained from Arabidopsis on plant virus susceptibility factors is likely to be transferable to crop species, Arabidopsis's natural variation was searched for host factors essential for PPV infection. To locate regions of the genome associated with susceptibility to PPV, linkage analysis was performed on six biparental populations as well as on multiparental lines. To refine quantitative trait locus (QTL) mapping, a genome-wide association analysis was carried out using 147 Arabidopsis accessions. Evidence was found for linkage on chromosomes 1, 3 and 5 with restriction of PPV long-distance movement. The most relevant signals occurred within a region at the bottom of chromosome 3, which comprises seven RTM3-like TRAF domain-containing genes. Since the resistance mechanism analyzed here is recessive and the rtm3 knockout mutant is susceptible to PPV infection, it suggests that other gene(s) present in the small identified region encompassing RTM3 are necessary for PPV long-distance movement. In consequence, we report here the occurrence of host factor(s) that are indispensable for virus long-distance movement.
dc.language.isoen
dc.publisherWiley
dc.subjectPPV
dc.subject.enArabidopsis thaliana
dc.subject.enassociation mapping
dc.subject.enPlum pox virus
dc.subject.enQTL mapping
dc.subject.enTRAF domain-containing proteins
dc.subject.envirus movement
dc.title.enFamily-based linkage and association mapping reveals novel genes affecting Plum pox virus infection in Arabidopsis thaliana
dc.typeArticle de revue
dc.identifier.doi10.1111/j.1469-8137.2012.04289.x
dc.subject.halSciences du Vivant [q-bio]/Biologie végétale/Phytopathologie et phytopharmacie
bordeaux.journalNew Phytologist
bordeaux.page873-886
bordeaux.volume196
bordeaux.issue3
bordeaux.peerReviewedoui
hal.identifierhal-02649106
hal.version1
hal.popularnon
hal.audienceInternationale
hal.origin.linkhttps://hal.archives-ouvertes.fr//hal-02649106v1
bordeaux.COinSctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=New%20Phytologist&rft.date=2012&rft.volume=196&rft.issue=3&rft.spage=873-886&rft.epage=873-886&rft.eissn=0028-646X&rft.issn=0028-646X&rft.au=PAGNY,%20Gaelle&PAULSTEPHENRAJ,%20Pauline%20Sandra&POQUE,%20Sylvain&SICARD,%20Oph%C3%A9lie&COSSON,%20Patrick&rft.genre=article


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