Nuclear and chloroplastic SNP markers for genetic studies of timber origin for Hymenaea trees
| hal.structure.identifier | Universidade de São Paulo = University of São Paulo [USP] | |
| dc.contributor.author | CHAVES, Camila L. | |
| hal.structure.identifier | Thünen Institute of Forest Genetics | |
| dc.contributor.author | BLANC-JOLIVET, Celine | |
| hal.structure.identifier | Instituto Florestal de São Paulo | |
| dc.contributor.author | SEBBENN, Alexandre M. | |
| hal.structure.identifier | Thünen Institute of Forest Genetics | |
| dc.contributor.author | MADER, Malte | |
| hal.structure.identifier | Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University [UNESP] | |
| dc.contributor.author | MEYER-SAND, Barbara R. V. | |
| hal.structure.identifier | Universidad Autonoma Gabriel René Moreno | |
| dc.contributor.author | PAREDES-VILLANUEVA, Kathelyn | |
| hal.structure.identifier | Instituto de Investigaciones de la Amazonía Peruana [IIAP] | |
| dc.contributor.author | HONORIO CORONADO, Eurídice N. | |
| hal.structure.identifier | Instituto de Investigaciones de la Amazonía Peruana [IIAP] | |
| dc.contributor.author | GARCÍA-DÁVILA, Carmen R. | |
| hal.structure.identifier | Ecologie des forêts de Guyane [UMR ECOFOG] | |
| dc.contributor.author | TYSKLIND, Niklas | |
| hal.structure.identifier | Ecologie des forêts de Guyane [UMR ECOFOG] | |
| dc.contributor.author | TROISPOUX, Valérie | |
| hal.structure.identifier | Biodiversité, Gènes & Communautés [BioGeCo] | |
| dc.contributor.author | MASSOT, Marie | |
| hal.structure.identifier | Thünen Institute of Forest Genetics | |
| dc.contributor.author | DEGEN, Bernd | |
| dc.date.issued | 2019 | |
| dc.identifier.issn | 1877-7252 | |
| dc.description.abstractEn | We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a genetic tracking method of the geographical origin of Hymenaea sp. From two initial sets of 358 and 32 loci used to genotype at least 94 individuals, a final set of 75 nSNPs, 50 cpSNPs and 6 INDELs identifying significant population structure was developed. | |
| dc.language.iso | en | |
| dc.publisher | Springer | |
| dc.subject.en | DNA-fingerprints | |
| dc.subject.en | geographical origin | |
| dc.subject.en | MiSeq | |
| dc.subject.en | RADSeq | |
| dc.title.en | Nuclear and chloroplastic SNP markers for genetic studies of timber origin for Hymenaea trees | |
| dc.type | Article de revue | |
| dc.identifier.doi | 10.1007/s12686-018-1077-1 | |
| dc.subject.hal | Sciences du Vivant [q-bio] | |
| bordeaux.journal | Conservation Genetics Resources | |
| bordeaux.page | 329-331 | |
| bordeaux.volume | 11 | |
| bordeaux.issue | 3 | |
| bordeaux.peerReviewed | oui | |
| hal.identifier | hal-02628115 | |
| hal.version | 1 | |
| hal.popular | non | |
| hal.audience | Internationale | |
| hal.origin.link | https://hal.archives-ouvertes.fr//hal-02628115v1 | |
| bordeaux.COinS | ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Conservation%20Genetics%20Resources&rft.date=2019&rft.volume=11&rft.issue=3&rft.spage=329-331&rft.epage=329-331&rft.eissn=1877-7252&rft.issn=1877-7252&rft.au=CHAVES,%20Camila%20L.&BLANC-JOLIVET,%20Celine&SEBBENN,%20Alexandre%20M.&MADER,%20Malte&MEYER-SAND,%20Barbara%20R.%20V.&rft.genre=article |
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