Nuclear and chloroplastic SNP markers for genetic studies of timber origin for Hymenaea trees
MEYER-SAND, Barbara R. V.
Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University [UNESP]
< Réduire
Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University [UNESP]
Langue
en
Article de revue
Ce document a été publié dans
Conservation Genetics Resources. 2019, vol. 11, n° 3, p. 329-331
Springer
Résumé en anglais
We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a ...Lire la suite >
We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a genetic tracking method of the geographical origin of Hymenaea sp. From two initial sets of 358 and 32 loci used to genotype at least 94 individuals, a final set of 75 nSNPs, 50 cpSNPs and 6 INDELs identifying significant population structure was developed.< Réduire
Mots clés en anglais
DNA-fingerprints
geographical origin
MiSeq
RADSeq
Project ANR
Plateforme d'Innovation " Forêt-Bois-Fibre-Biomasse du Futur "
Optique Ultrarapide, Nanophotonique et Plasmonique
CEnter of the study of Biodiversity in Amazonia
Optique Ultrarapide, Nanophotonique et Plasmonique
CEnter of the study of Biodiversity in Amazonia
Origine
Importé de halUnités de recherche