CHAVES, Camila L.; BLANC-JOLIVET, Celine; SEBBENN, Alexandre M.; MADER, Malte; MEYER-SAND, Barbara R. V.; PAREDES-VILLANUEVA, Kathelyn; HONORIO CORONADO, Eurídice N.; GARCÍA-DÁVILA, Carmen R.; TYSKLIND, Niklas; TROISPOUX, Valérie; MASSOT, Marie; DEGEN, Bernd

doi:10.1007/s12686-018-1077-1

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Licencia de uso del documento

CHAVES, Camila L.
Universidade de São Paulo = University of São Paulo [USP]

BLANC-JOLIVET, Celine
Thünen Institute of Forest Genetics

SEBBENN, Alexandre M.
Instituto Florestal de São Paulo

Idioma

Article de revue

Este ítem está publicado en

Conservation Genetics Resources. 2019, vol. 11, n° 3, p. 329-331

Springer

Resumen en inglés

We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a genetic tracking method of the geographical origin of Hymenaea sp. From two initial sets of 358 and 32 loci used to genotype at least 94 individuals, a final set of 75 nSNPs, 50 cpSNPs and 6 INDELs identifying significant population structure was developed.< Leer menos

Palabras clave en inglés

DNA-fingerprints

geographical origin

MiSeq

RADSeq

DOI

http://dx.doi.org/10.1007/s12686-018-1077-1

Proyecto ANR

Plateforme d'Innovation " Forêt-Bois-Fibre-Biomasse du Futur "
Optique Ultrarapide, Nanophotonique et Plasmonique - ANR-10-EQPX-0052
CEnter of the study of Biodiversity in Amazonia

Orígen

Importado de Hal

Centros de investigación

BioGeCo (Biodiversité Gènes & Communautés) - UMR 1202